Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5918 ATGGCGAGAAAAACCAGCAACTGTGCCATATGCGAGAATTCAAATCAAGCTTCGATATGTTCTATTTGTGTCAACTATAGGTTGAATGAGTATACCACCTCTTTGAAATCACTGAAAGAGCGTCGAGATTCGTTGTCCACGAAATTGAGCGAGGTTCTCGTCCGCAAGGGGAAAGGAGATGATCAAACAAATTGGAGAGTGCTTCAACATGAAAAGCTCGCAAGGTTGAAGGAGAAGCTCCGTCACAGTAAAGAACAAGTTGCTCAAGGAAGAGCTAAGATAGGGACTATGTCTGCGGATCTGAAACTTAAATATGGAGTGCTTGAATCTGCCCTTTCTACGTTGGAAAAGAATCGAGTGGAACAACTGGAGAAGTTCTACCCTAATCTTATATGCACACAGAGTTTAGGGCATGTGGCGATAACCTCTGAGCGTCTTCATAAACAGTCTGTGGTCATAAAGCAGATATGCAAGTTATTTCCACAACGCCGGGTGGTTATCGAGGGGGAAACAAAGGATGGTTGTAGCGGTCAATATGATCAAATTTGCAATGCACGCTTACCAAGAGCACTTGATCCCCATTCTGTTCCATCAGAAGAACTTTCTGCTTCTTTGGGATACATGGTGCAACTTCTAAATCTTGTTCTTCACAACTTGGCTGCCCCAGCACTTCATAACTCAGGTTTTGCGGGTTCTTGCTCTAGAATATGGCAACGGGATTCTTATTGGGATGCACGTCCTTCCTCTAGGAGTAATGAATATCCCCTTTTTATACCTCGCCAAAATTATTGCTCAACTAGTGGGGAAAACTCTTGGTCGGATAAAAGCTCAAGCAACTTCGGTGTTGCATCAATGGAATCTGACAGGAGGCCTCGCCTGGATTCATCTTCGAGTAGTAGCTTTAATTATTCTTTAGCTTCTTCACATTCGGTTCAGACACACAAAGATCTGCAGAAAGGAATTTCACTTTTAAAGAAAAGTGTAGCATGTGTCACATCTTACTGTTATAACTCCCTATGCTTGGATGTCCCTTCTGAGGCATCTACGTTTGAAGCATTTGCGAAGTTATTGGCTACACTCTCATCATCCAAGGAAGTCCGATCTGTTTTTTCCTTGAAAATGGCTCGCTCTAGGACATGTAAGCAAGTTCAGCAATTGAACAAATCTGTATGGAATATGGATTCTACTATTTCATCAACTACTTTGCTGGAAAGTGCACATTCTGTGCCGCCAATGAGAATTGAAAATTATATGCCAAGTTCTGGCACTAGTTTTCTTTATGCCACTGATTTATCCGACGGAAAAAGTGAGTGCCTATTTGAAGGGTGGGATATTGTTGAGCGTCCTCCATTTCCTCCCCCACCATCACAAAGTGAGGATGTTGAGCACTGGACTCGGGCCATGTTCATAGATGCTAAAAGGAAGTGA 1428 0.4279 MARKTSNCAICENSNQASICSICVNYRLNEYTTSLKSLKERRDSLSTKLSEVLVRKGKGDDQTNWRVLQHEKLARLKEKLRHSKEQVAQGRAKIGTMSADLKLKYGVLESALSTLEKNRVEQLEKFYPNLICTQSLGHVAITSERLHKQSVVIKQICKLFPQRRVVIEGETKDGCSGQYDQICNARLPRALDPHSVPSEELSASLGYMVQLLNLVLHNLAAPALHNSGFAGSCSRIWQRDSYWDARPSSRSNEYPLFIPRQNYCSTSGENSWSDKSSSNFGVASMESDRRPRLDSSSSSSFNYSLASSHSVQTHKDLQKGISLLKKSVACVTSYCYNSLCLDVPSEASTFEAFAKLLATLSSSKEVRSVFSLKMARSRTCKQVQQLNKSVWNMDSTISSTTLLESAHSVPPMRIENYMPSSGTSFLYATDLSDGKSECLFEGWDIVERPPFPPPPSQSEDVEHWTRAMFIDAKRK* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5918 475 Coils Coil 73 93 - -
Lja1g5918 475 MobiDBLite consensus disorder prediction 268 297 - -
Lja1g5918 475 Pfam Vacuolar sorting 38 and autophagy-related subunit 14 8 366 IPR018791 -
Lja1g5918 475 Coils Coil 28 55 - -
Lja1g5918 475 MobiDBLite consensus disorder prediction 268 284 - -
Lja1g5918 475 PANTHER UV RADIATION RESISTANCE-ASSOCIATED GENE PROTEIN 1 475 - -
Lja1g5918 475 PANTHER DNA-DIRECTED RNA POLYMERASE II PROTEIN 1 475 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5918 - - gmx:100776426 865.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5918 1 108230052 108238688 Lja1g5918 1 108230052 108238688 ECH