Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5915 ATGGACCCTTGTCCTTCTTCCACCAACACAAACTCAGTGAGTGGCTTCTACACGTTTCTCACCAGAGGAATTGAGGACTTAGACAGAGCCTTTGTTTCTTCCACCAACAACTTCACCATGTCAATCCAATTCCTCCAAAGAGCACTTTCCATCCTCCGATCCTTCCACACTCACCTCACCCTTCTAGTCCAAAAGCTCCACCTCCCCGTCGGCGACAAGTGGCTCGACGAGTACATGGATGAGACCTCCAAGCTCTGGGAAACTTGCCATGTTCTCAAGTCTGGCGTTTCTGGCATAGAAGGTTACTACTCTGCAGGACTCAACATCACTTCCTCTTTTGACTCTCACCCTCACCTCACTCCTCAACTCTGGCGCCAGGTTCTGAGGGCAATATCAGCATGTCGCAGGGAAGCTGTGGGGTTGGAAGAGGAGAATCGTTCATTGATGGAAACAAGAATCCACACACTTCCTCTGCATTTCGACGAGAGGGTATCCATGGAATCCAAGCTGAATGGATTCAACGGCTTTAGGGGTGTTCTGTATGCAATGAGGAACATTAGTTCAATGCTGCTCACTATCTTGTTACAAGGGCTGGTGTACCGGTGCCCGGATACCCCAGACATGGTTCTGGGAGGCTACGAGGGTGGCCGTTTGTTTCTGGGGTCGGGGCTAATGGTATCGGCCGCGAGGCTGCAGCAGAAAGTGGCGGCGGAGATTGGTGGTGCGCAGCCGGGGATGCTACTGTATGAGTTCAGGAGGTCGAGGGTGGCGGTGGAGGAGCTGAGAGGGGAATTGGAGAGGTGGGGGTCACAGCATGTTGAGTGGGAAATGGAGGTTGGTTTGAGGGAGAGAGTGGAGAATCTCAGAATGTGTTTTGGGGTGCTGAAATCTGGTGCAGAGAGTGTTGTTTGCCAGCTAGATGATTTCTTTGATGAGATTGTGGAGGGTAGGAAGAAGCTTTTGGATTTTTGTAGTCATAGGTGA 984 0.5132 MDPCPSSTNTNSVSGFYTFLTRGIEDLDRAFVSSTNNFTMSIQFLQRALSILRSFHTHLTLLVQKLHLPVGDKWLDEYMDETSKLWETCHVLKSGVSGIEGYYSAGLNITSSFDSHPHLTPQLWRQVLRAISACRREAVGLEEENRSLMETRIHTLPLHFDERVSMESKLNGFNGFRGVLYAMRNISSMLLTILLQGLVYRCPDTPDMVLGGYEGGRLFLGSGLMVSAARLQQKVAAEIGGAQPGMLLYEFRRSRVAVEELRGELERWGSQHVEWEMEVGLRERVENLRMCFGVLKSGAESVVCQLDDFFDEIVEGRKKLLDFCSHR* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5915 327 PANTHER BPS1-LIKE PROTEIN 1 327 - -
Lja1g5915 327 Coils Coil 258 278 - -
Lja1g5915 327 PANTHER - 1 327 - -
Lja1g5915 327 Coils Coil 131 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5915 Lja-Chr1 108141889 108143797 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5915 - - mtr:MTR_5g060880 489.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5915 1 108141889 108143797 Lja1g5915 1 108141889 108143797 ECH
Lja1g5915 1 108141889 108143797 Lja1g5109 1 73761395 73763167 PCT