Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5903 ATGCGTGAGACGGCACTCGCGTGTGAAGACCTCGCCGACGACGTGGTCTCAACCACGAAGAAGAACAAGCCGGAGCCGGAGAAGGAGGACCGGGAGAAGCCATCTCCGGTGGCGGTCGCCGGGAGGAGCAGGTCTCAGGGAGCAGGAACCCGGAGAGTGACGCCGGCGAGCGTGACGGCGGTTTCCGGCACCGGATCCGCGGTGGAGAGGGTGCTCCCGAACGGAGATTTCTACGCCGGGAGCTTCTCCGGCACCGTCCCTCACGGATCCGGGAAGTATCTGTGGACGGACGGGTGCATGTACGAGGGGGAATGGAAGCGCGGTAAGGCCTCCGGGAAGGGGAAATTCTCGTGGCCCTCCGGCGCCACCTACGAGGGGGAGTTCAAGTCGGGTCGGATGGAAGGATTCGGAACGTTTGTCGGGTCCGACGGCGACACCTACCGCGGGTCGTGGAGCTCCGACAGGAAGAACGGGTTCGGCGTGAAGCGATACGCGAACGGGGATGTGTATGAAGGGTGGTGGAAGCGGAATCTGCAAGACGGGCATGGCCGTTACGTGTGGCGGAACGGCAGCGTCTACGTCGGAGAGTGGCGGAACGGTGTCGTTTCCGGGAAGGGGAAGTTTGAGCCAGCTGAAGGGTTGGTGAAGGTGAAGAGTGGTGGTGGGTTGTGGGGTGGTGACGATTTTGCCCTTGCGATGAGGAAACGGTCTTCGGTGGATACTGTTAGCGGGAGAGGGAGTGTGAATGAGAAGAGCTTTCCGAGGATTTGCATTTGGGAATCGGAGGGTGAAGCTGGTGATATCACATGTGATATCATTGATAATGTGGAAGCTTCGATGTTCTATAGGGATGGTACTGTTTCGGATCGTGATGATGGGTTGTTGTTTAGGAAGAACCCTTGTTGTTTCCCTTCGGATGTGAAGAGACCTGGTCAAATGATATCCAAGGGGCATAAGAATTATGAGCTGATGCTTAATCTGCAGTTGGGGATAAGGTACTCTGTTGGGAAGGAAGCATCGAAGTTGCGAATGCTTAAATCGAGTGATTTCGATCCCAAGGAGAAGTTCTGGACCAGGTTTCCACCTGAAGGAACCAAGCTTACACCGCCCCATCAAACCGCTGAATTCCGGTGGAAGGATTATTGCCCTGTGGTTTTTAGACATTTGAGGAAGCTGTTTCAAGTGGATCCTGCTGATTACATGCTGGCTATATGTGGGAATGCTGCTCTCAGGGAGCTTTCCTCTCCTGGTAAAAGTGGAAGCATCTTCTACTTGACCCACGATGATAGGTTCATGATAAAGACAGTGAAGAAATCTGAAGTCAAGGTGCTTTTACGGATGCTTCGAAGTTATTACCAGCATGTGTCTAGATATGAGAATTCATTTGTGACAAAGTTCTATGGGGTACACTGTGTCAAACCAATTGGAGGCCAGAAGATCCGGTTCATTGTGATGGGTAATCTTTTCTGCTCTGAATACCCAATTCATAGACGATTTGATTTGAAAGGATCTTCACATGGCCGTACAACTGATAAACCTGAGGAGGAGATTGATGAAACTACCACCCTCAAGGACCTTGATCTCAATTTTGTGTTTCGTGTACAGAAAAGTTTGTTCCAGGACCTTATCAAACAGATTGAGCGGGATTGCGAGTTCTTGGAAGCTGAGAGAATTATGGATTACAGTCTTTTGGTTGGCCTTCATTTTCGTGATGATAATACATGTGACAAGATGGGATTGTCACCTTTTCTTTTACGCACTGGCGCTCGGGATTCTTATCAGAGTGAGAAATTCATGCGTGGTTATCGCTTTCTTGAAGCTGAGCTGCAAGATAGGGATCGAGTTAAATCTGGAAGGAAGTCATTAATTAGGCCAGGAGCCAATATGCCCGCAAGAGCAGAACGAATGGCACGAAGGAGTGATTTTGATCAATACAACACTGTTGGAATCAGCCATTTGGCCCCATATTGCAGTGGGGAAACTTATGATGTCGTTCTGTACTTCGGCATTATCGACATTTTGCAAGATTATGATATCAGCAAGAAGCTTGAGCATGCCTACAAGTCCTTACAGGTTGACCCCACTTCAATTTCTGCTGTTGATCCAAAGCTCTACTCGAGGAGGTTTCGTGATTTTATCGGGAGAATATTCATTGAAGACTGGTAG 2166 0.5009 MRETALACEDLADDVVSTTKKNKPEPEKEDREKPSPVAVAGRSRSQGAGTRRVTPASVTAVSGTGSAVERVLPNGDFYAGSFSGTVPHGSGKYLWTDGCMYEGEWKRGKASGKGKFSWPSGATYEGEFKSGRMEGFGTFVGSDGDTYRGSWSSDRKNGFGVKRYANGDVYEGWWKRNLQDGHGRYVWRNGSVYVGEWRNGVVSGKGKFEPAEGLVKVKSGGGLWGGDDFALAMRKRSSVDTVSGRGSVNEKSFPRICIWESEGEAGDITCDIIDNVEASMFYRDGTVSDRDDGLLFRKNPCCFPSDVKRPGQMISKGHKNYELMLNLQLGIRYSVGKEASKLRMLKSSDFDPKEKFWTRFPPEGTKLTPPHQTAEFRWKDYCPVVFRHLRKLFQVDPADYMLAICGNAALRELSSPGKSGSIFYLTHDDRFMIKTVKKSEVKVLLRMLRSYYQHVSRYENSFVTKFYGVHCVKPIGGQKIRFIVMGNLFCSEYPIHRRFDLKGSSHGRTTDKPEEEIDETTTLKDLDLNFVFRVQKSLFQDLIKQIERDCEFLEAERIMDYSLLVGLHFRDDNTCDKMGLSPFLLRTGARDSYQSEKFMRGYRFLEAELQDRDRVKSGRKSLIRPGANMPARAERMARRSDFDQYNTVGISHLAPYCSGETYDVVLYFGIIDILQDYDISKKLEHAYKSLQVDPTSISAVDPKLYSRRFRDFIGRIFIEDW* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5903 721 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 306 487 IPR027484 -
Lja1g5903 721 MobiDBLite consensus disorder prediction 1 57 - -
Lja1g5903 721 Coils Coil 536 556 - -
Lja1g5903 721 CDD PIPKc_AtPIP5K_like 320 716 - -
Lja1g5903 721 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 36 211 IPR023610 -
Lja1g5903 721 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 224 720 IPR023610 -
Lja1g5903 721 MobiDBLite consensus disorder prediction 1 37 - -
Lja1g5903 721 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 73 160 - -
Lja1g5903 721 Pfam MORN repeat 101 122 IPR003409 -
Lja1g5903 721 Pfam MORN repeat 124 146 IPR003409 -
Lja1g5903 721 Pfam MORN repeat 193 208 IPR003409 -
Lja1g5903 721 Pfam MORN repeat 170 192 IPR003409 -
Lja1g5903 721 Pfam MORN repeat 78 100 IPR003409 -
Lja1g5903 721 Pfam MORN repeat 147 169 IPR003409 -
Lja1g5903 721 Gene3D - 63 107 - -
Lja1g5903 721 Gene3D - 153 213 - -
Lja1g5903 721 Gene3D - 108 152 - -
Lja1g5903 721 SMART morn 191 212 IPR003409 -
Lja1g5903 721 SMART morn 122 143 IPR003409 -
Lja1g5903 721 SMART morn 145 166 IPR003409 -
Lja1g5903 721 SMART morn 99 120 IPR003409 -
Lja1g5903 721 SMART morn 168 189 IPR003409 -
Lja1g5903 721 SMART morn 76 97 IPR003409 -
Lja1g5903 721 PIRSF PIP5K_plant 14 224 IPR017163 GO:0005524|GO:0016308
Lja1g5903 721 PIRSF PIP5K_plant 217 721 IPR017163 GO:0005524|GO:0016308
Lja1g5903 721 SMART PIPK_2 346 718 IPR002498 GO:0016307|GO:0046488
Lja1g5903 721 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 2 36 211 - -
Lja1g5903 721 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 2 224 720 - -
Lja1g5903 721 Gene3D - 488 717 - -
Lja1g5903 721 SUPERFAMILY SAICAR synthase-like 316 717 - -
Lja1g5903 721 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 405 715 IPR002498 GO:0016307|GO:0046488
Lja1g5903 721 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 313 717 IPR002498 GO:0016307|GO:0046488
Lja1g5903 721 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 142 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5903 Lja-Chr1 107812428 107817140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5903 42 720 Acyl Lipid Metabolism Gene Families AT1G21980 72.612 0.0 1024
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5903 K00889 - gmx:100790632 1189.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5903 1 107812428 107817140 Lja1g5903 1 107812428 107817140 ECH