Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5894 ATGAAATCAAAGGCGGCACACGTCCATAACGGAAACGGTTACGCCAGCGAGACTTGCGCCGGAAGATGCGGCGGCGGGAGCAGCAGCGGGAGCTCGCCGAGTCCGCCGCCGTCGCCGCGGCGGAAGACGACGCAATGCAGGAGGAGAATGCGGCCGGTGAAGGACTTGGCGGAGACGCGGCGGCTTGCCGCCGGGATCATGGCGCGGCGGAGCCTCAGGTACTTCTTCCTGCTTCCGGTAGTGTACATCTTCGGTCTCCTCATGTGCGTCGGCCCCTTCCCCTTCCCGTTGTTCTCTCACGCGCCTCTTCCTGGTTCCCGTTACCGCAGCCATGAGGTTTTCCACAAGCTCTGGCATGATATTGAGTCTGATAATTCCTCTGCCATTCAGTTATCTTCTGTGTGGAAGTACAAGAGGAAGTTGAGAGAGCAGAAGCCATGTCCGAATTTGACTGCATTGTATCATGAACATATCGTTTCCCCTGGCCTGAATGGTTTTTTAATTGTGGAGGCCAATGGTGGTCTTAACCAGCAACGCTCCGCGATTTGCAATGCTGTGGCTGTTGCTGGACTCCTGAACGCAATACTGGTTATACCTCACTTTGAATTCCACAGTGTGTGGAAAGACCCAAGTGAATTCGGGGATATATATGATGAGGATCATTTTATATCCACACTTGATGGTTATGTGAAGGTGGTAAAAGAACTGCCTGAGGCACTAATGGAGAGGCATAATTACAATATGAGTAATATAACTAACATCAAAGTTCAAGCTTGGGCTCCTGTCAGTTATTACCTGGGAGTTGTTTATCCTATCTTGCAAAAGGAAGGGGTTATTCGAATAGCTCCATTTGCCAACCGTTTGGCCATGAGTGTCCCTCCACATATTCAATTTCTAAGATGTCTTACTAATTATAGAGCATTGAGGTTTTCTCCTTCAATATCCTCATTAGCTGAGAAACTGGTTTACCGAATGACTGAGAAGAGCTCAAGGACAGATGGAAAATATATTGCTGTGCATCTTCGCTTTGAGGAGGACATGATAGCATTCTCCTGTTGTGTATATGATGGAGGAAAGGCAGAGAAGTCAGAAATGGATTCGGCTCGGGAAAAGGGGTGGAGGGGAAAATTTAAAAGAAAAGATCGTATTATTGTTCCTGACCTCAATCGAGTCAATGGAAAATGCCCATTAACCCCTCTGGAGGTTGGTATGATGCTACGTGGCCTGGGGTTCGACAATAATACTTCAATATATTTAGCTTCTGGGAAAATATATCATGCAGAGAGATATTTAGCTCCTTTGTTAAAGATGTTTCCCAATCTGTATACAAAGGAGTCTCTTGCAACATCAGATGAGCTTGCTCCTTTTATGGGCTATTCCTCCCAATTGGCAGCACTGGACTATACTGCATCCTTGTTTAGTGAGGTTTTTGTTACCACTCAGGGTGGTAACTTCCCTCATTTTCTGATGGGTCATAGAAGATTCCTCTATGATGGACATGCCAAGACCATTATTCCGGATAAACGGAAGCTTGTTGTTCTTTTCGAGGACATGAGTATCAGTTGGAAAGCTTTCAAGGATCAGATGGAAAACATGCTCACAGAAAGTGACCGCAAAGGAATCATGGTCCCTAGAGTTAGAAAAATCAACAGAAAAACTTCTGTCTACACTTACCCTCTACCAGAATGTAGGTGCCTACAGCAGTCTCATTCCCATCAAATTGACCTAAACCTAGACATTCCTGAGAATCACAGCAGAACAAAAGCTTAA 1770 0.461 MKSKAAHVHNGNGYASETCAGRCGGGSSSGSSPSPPPSPRRKTTQCRRRMRPVKDLAETRRLAAGIMARRSLRYFFLLPVVYIFGLLMCVGPFPFPLFSHAPLPGSRYRSHEVFHKLWHDIESDNSSAIQLSSVWKYKRKLREQKPCPNLTALYHEHIVSPGLNGFLIVEANGGLNQQRSAICNAVAVAGLLNAILVIPHFEFHSVWKDPSEFGDIYDEDHFISTLDGYVKVVKELPEALMERHNYNMSNITNIKVQAWAPVSYYLGVVYPILQKEGVIRIAPFANRLAMSVPPHIQFLRCLTNYRALRFSPSISSLAEKLVYRMTEKSSRTDGKYIAVHLRFEEDMIAFSCCVYDGGKAEKSEMDSAREKGWRGKFKRKDRIIVPDLNRVNGKCPLTPLEVGMMLRGLGFDNNTSIYLASGKIYHAERYLAPLLKMFPNLYTKESLATSDELAPFMGYSSQLAALDYTASLFSEVFVTTQGGNFPHFLMGHRRFLYDGHAKTIIPDKRKLVVLFEDMSISWKAFKDQMENMLTESDRKGIMVPRVRKINRKTSVYTYPLPECRCLQQSHSHQIDLNLDIPENHSRTKA* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5894 589 PANTHER - 31 575 IPR024709 -
Lja1g5894 589 PIRSF UCP009360 39 569 IPR024709 -
Lja1g5894 589 MobiDBLite consensus disorder prediction 22 51 - -
Lja1g5894 589 Pfam GDP-fucose protein O-fucosyltransferase 166 495 IPR019378 -
Lja1g5894 589 CDD O-FucT_plant 166 503 IPR024709 -
Lja1g5894 589 PANTHER O-FUCOSYLTRANSFERASE 10-RELATED 31 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5894 Lja-Chr1 107584228 107589479 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5894 165 565 Miscellaneous Gene Families AT1G22460 39.518 3.91e-89 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5894 - - gmx:100812590 996.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5894 1 107584228 107589479 Lja1g5894 1 107584228 107589479 ECH