Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5892 ATGGCGAGCGGTGGAAAGGTTTCATTCAAAGTCACACTCACCTCCGATCCAAAGCTACCCTTCAAAGTGTTCAGCGTTCCGGAGGCTGCACCTTTCACCGCCGTTCTCAAATTCGCAGCTGAAGAATTCAAAGTCCCTCCCCAAACCAGCGCCATCATCACCAATGATGGTGTTGGGATAAATCCTCAGCAGAGTGCAGGAAATGTTTTCCTCAAGCATGGTTCAGAACTTCGCCTGATTCCGCGTGATAGGGTTGGTGCATCCCAGATGGTACGGGATGTCTGA 285 0.5088 MASGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGASQMVRDV* 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5892 94 CDD Ubl_UFM1 7 81 - -
Lja1g5892 94 Pfam Ubiquitin fold modifier 1 protein 6 80 IPR005375 GO:0071569
Lja1g5892 94 Gene3D - 1 88 - -
Lja1g5892 94 PIRSF Ufm1 1 88 IPR005375 GO:0071569
Lja1g5892 94 SUPERFAMILY Ubiquitin-like 2 86 IPR029071 -
Lja1g5892 94 PANTHER UBIQUITIN-FOLD MODIFIER 1 3 90 IPR005375 GO:0071569
Lja1g5892 94 PANTHER UBIQUITIN-FOLD MODIFIER 1 3 90 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5892 K12162 - gmx:100815619 180.644
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5892 1 107555704 107559948 Lja1g5892 1 107555704 107559948 ECH