Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5885 ATGGAGGTGCTAAGGGTGCAAAGCGTAGCAGCCCAGTCAAAAGATGCTTCCATCCCCGCGATGTTCGTGAGGTCGGAGACAGAGCAGCCCGGCATCACGACCGTTCGCGGGGTGGAATTGGAGGTGCCGATCATTGATTTGAACGGCACCGATGAAGTGAAGGTGCTGAGTGAGATCGTGGAGGCGAGTAAGGAGTGGGGGATGTTTCAAGTTGTGAATCATGAGATACCTAGTGAAGTTATAGCCAAATTGCAGGCTGTGGGGAAAGAGTTCTTTGAGTTGCCACAAGAGGAAAAAGAGGTGTATGGTAAGATTGAAGGGTCTGATTCTTTGGAAGGTTATGGGACCAAGCTTCAGAAAGAGGTGAATGGGAAGAAAGGTTGGGTGGATCATTTGTTTCATATTATTTGGCCAACTTCTTCCATTAACTACCGTTTCTGGCCTAAGAATCCTGCTTCCTACAGGGAGGTGAATGAGGAATATGGCAAGTACCTGCGTAGTGTGGCGGACAAACTTTTCAAAAGCATGTCAATTGGGCTGGGCCTTGAAGAAAATGAGCTAAAGGAAGCTGCAGGTGGAGATGACATGATTCACCTATTAAAGATCAACTACTACCCACCATGTCCATGTCCTGATCTTGTTCTGGGTGTGCCACCACACACAGACATGTCATTCGTGACCATTTTGGTCCCCAACGAGGTGCAGGGCCTCCAAGCATTCAGGGATGGTCACTGGTACGATGTTAAGTATGTCCCCAATGCCCTCGTCATTCACATTGGAGACCAAATGGAGATACTGAGCAATGGGAAATATAAGGCTGTCCTGCACAGAACAACAGTGAACAAAGAGGAGACAAGAATGTCATGGCCGGTGTTCATAGAGCCCCAAGGAGACCATGAAGTTGGTCCTCACTCCAAGTTGGTTAACCAAGACAATCCACCAAAATACAAGACCAAGAAATATAAGGACTATGCCTACTGCAAGCTCAACAAGATCCCTCAGTAA 1005 0.4756 MEVLRVQSVAAQSKDASIPAMFVRSETEQPGITTVRGVELEVPIIDLNGTDEVKVLSEIVEASKEWGMFQVVNHEIPSEVIAKLQAVGKEFFELPQEEKEVYGKIEGSDSLEGYGTKLQKEVNGKKGWVDHLFHIIWPTSSINYRFWPKNPASYREVNEEYGKYLRSVADKLFKSMSIGLGLEENELKEAAGGDDMIHLLKINYYPPCPCPDLVLGVPPHTDMSFVTILVPNEVQGLQAFRDGHWYDVKYVPNALVIHIGDQMEILSNGKYKAVLHRTTVNKEETRMSWPVFIEPQGDHEVGPHSKLVNQDNPPKYKTKKYKDYAYCKLNKIPQ* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5885 334 Pfam 2OG-Fe(II) oxygenase superfamily 197 295 IPR044861 -
Lja1g5885 334 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 196 295 IPR005123 -
Lja1g5885 334 SUPERFAMILY Clavaminate synthase-like 12 332 - -
Lja1g5885 334 PANTHER FLAVONOL SYNTHASE/FLAVANONE 3-HYDROXYLASE 4 331 - -
Lja1g5885 334 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 331 - -
Lja1g5885 334 Pfam non-haem dioxygenase in morphine synthesis N-terminal 42 148 IPR026992 -
Lja1g5885 334 Gene3D - 1 332 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5885 Lja-Chr1 106954319 106961080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5885 39 325 Glycosyltransferase AT5G59530 30.537 7.10e-42 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5885 K05278 - gmx:778157 576.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5885 1 106954319 106961080 Lja1g5885 1 106954319 106961080 ECH