Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5875 ATGGAAGCTCCGAAGCTCACCCGAACCAAATCGTCTTTGCTCCGGTGTTCTTCTCCGACGACCCGATCCTCTATTCCGAGCTTCACCTCGGTCAACGTCGACGAGTTTCGGGAAGAGGAGGAGGAGGAAGAAGAAGAGAAGAAGCCGAAAACCAGGAACAAGAAGAGGAACAGTACAAACCGGGTCGTGAAACCCGGTTCGGGTTCGATCCGGTTCTTGGTTGCTCCGGTTCTGTGCTTGTTCGGCGCGTTTTCGCTGTTGTTCTACCCTCTGTATTTCTTCTTCTTCATCCTCGGAGGACCCACTTCCGAGAATGTTTTGCTGGTTCTGATCTTTGTTGCGGTGGCGTTGTATCTGGTCAACCGGAACAAGGGTTTGATCCAGAGGAGTGTTTCGGTTTGGAAGCATTCGTGGGATGGGAACCTGAAGTGGCTTGGTTTTTCGTCAAAGGGTAGTGAGAAACCGGTTCAGTGGTTCATCGGAGACGCTTGTTCGGTGGTGAAGGAGGAGAAGAAGGGGCTTGGGATGAAAGGGGTTGTGTCTACGGCGAGGGAAGGGGTTGAGTTTTACGGCAATGGAGATTTCTATGAGGGTGAGTTTCATGGAGGGAAGTGTAATGGGAGTGGGGTTTATCACTTCTTTGTCAGTGGAAGATATGAGGGTGATTGGGTTGAAGGGAAGTATGATGGGTATGGAATTGAAAGCTGGGCTAGGGGTAGCCGCTACAGGGGGCAATATAGGCAAGGAATGAGGCATGGTTATGGGGTTTACAAGTTCTTCACTGGTGATTCTTATTCAGGGGAATGGTGTAATGGGCAGAGCCATGGTATGGGATTGCAGTGTTGTTCTGATGGTAGCTCCTATGTTGGTCAATTTAAGTATGGGGTCAAGCATGGACTTGGATGTTACCATTTTAGAAATGGAGATCGATATGCCGGTGAATATTTTTCAGACCACATACATGGATTTGGAATCTACCACTTTGCCAATGGCCATTGTTATGAAGGGGCATGGCATGAAGGTCGTAGGCAGGGGTATGGTGTGTATACTTTTCGAAATGGTGAACGAAAATGCGGTGAATGGGATGCGGGCAACCTCAAGCACTCTCTACCACCACTAACTGATGCTATCATTCGAGCAGTTCAGGCTGCTAGGAAAACAGCAGAAAATGCTATAAACCTTCCCAGGAATGATGAGATTGTGAACAAAGCAGTAATGGCTGCAAACAGGGCTGCCACTGCTGCTAGAGTTGCTGCAGTTAAAGCTGTTCAGAGTAGAATGGGTGGGAATTTTTGCGACACTGATGTCTAA 1311 0.4851 MEAPKLTRTKSSLLRCSSPTTRSSIPSFTSVNVDEFREEEEEEEEEKKPKTRNKKRNSTNRVVKPGSGSIRFLVAPVLCLFGAFSLLFYPLYFFFFILGGPTSENVLLVLIFVAVALYLVNRNKGLIQRSVSVWKHSWDGNLKWLGFSSKGSEKPVQWFIGDACSVVKEEKKGLGMKGVVSTAREGVEFYGNGDFYEGEFHGGKCNGSGVYHFFVSGRYEGDWVEGKYDGYGIESWARGSRYRGQYRQGMRHGYGVYKFFTGDSYSGEWCNGQSHGMGLQCCSDGSSYVGQFKYGVKHGLGCYHFRNGDRYAGEYFSDHIHGFGIYHFANGHCYEGAWHEGRRQGYGVYTFRNGERKCGEWDAGNLKHSLPPLTDAIIRAVQAARKTAENAINLPRNDEIVNKAVMAANRAATAARVAAVKAVQSRMGGNFCDTDV* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5875 436 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 14 430 - -
Lja1g5875 436 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 190 295 - -
Lja1g5875 436 MobiDBLite consensus disorder prediction 10 31 - -
Lja1g5875 436 SMART morn 263 284 IPR003409 -
Lja1g5875 436 SMART morn 217 238 IPR003409 -
Lja1g5875 436 SMART morn 194 215 IPR003409 -
Lja1g5875 436 SMART morn 240 261 IPR003409 -
Lja1g5875 436 SMART morn 286 307 IPR003409 -
Lja1g5875 436 SMART morn 309 330 IPR003409 -
Lja1g5875 436 SMART morn 332 353 IPR003409 -
Lja1g5875 436 Gene3D - 271 316 - -
Lja1g5875 436 Gene3D - 317 376 - -
Lja1g5875 436 Gene3D - 221 270 - -
Lja1g5875 436 Pfam MORN repeat 242 263 IPR003409 -
Lja1g5875 436 Pfam MORN repeat 311 332 IPR003409 -
Lja1g5875 436 Pfam MORN repeat 265 286 IPR003409 -
Lja1g5875 436 Pfam MORN repeat 334 356 IPR003409 -
Lja1g5875 436 Pfam MORN repeat 196 213 IPR003409 -
Lja1g5875 436 Pfam MORN repeat 219 241 IPR003409 -
Lja1g5875 436 Pfam MORN repeat 288 310 IPR003409 -
Lja1g5875 436 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 283 364 - -
Lja1g5875 436 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 14 430 - -
Lja1g5875 436 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5875 Lja-Chr1 106691583 106694198 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5875 159 370 Acyl Lipid Metabolism Gene Families AT1G21980 33.491 5.33e-32 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5875 - - gmx:100806547 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5875 1 106691583 106694198 Lja1g5875 1 106691583 106694198 ECH