Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5868 ATGGCCAGAACAACAACAACCACCCCACACCGCCACTACTTCACTTTCTCACTCTTCCTCCACCTCACTCTCCTCCTCTCACTTCTTCCCTTCTCCGCCACCACCACCACCACCACCGAACAAGAACAAGACAACCCCATCACACGCTTCCAACGCTACCTCCAAATCAACACCGCGCACCCAAACCCCGACTACACCTCCGCCGTCTCCTACCTCATCACCCAAGCCTCCTCCATCAACCTTCGCCACAAAACCCTCCACTTCTCCCCCGGAAACCCCCTCCTCCTCCTCACATGGCCCGGCTCCAACCCTTCCCTCCCCTCCATCCTCCTCAACTCCCACCTCGACTCCGTCCCCGCCGAGCCCTCCAAATGGCTCCACCCTCCCTTCTCCGCCACGCGCGACCCCGACACCGGCGCCATCTTTGCCCGCGGCGCGCAGGATGACAAGTGCATCGCTATGCAGTACCTCGAAGCCATCCGCAACCTGAAGTCCCAAGGATACGCGCCTGCACGCACCGTCCATATCTCGCTTGTTCCTGATGAGGAGGTTGGGGGATTCCGCGGCTCTGCGATGTTCGCGGAGTCGGAGGAGTTTGCGGCGTTGAGCGTTGGGTTTGCGCTGGATGAAGGGCAGGCTAACCCTGGGGATGAGTTTAGGGTTTTCTACGCGGATCGGATTCCGTGGGAGGTGAAGATCAAGGCGAAGGGGAGACCGGGGCATGGTTCGAAGATGTATGATGATAGCGCGATGGAGAATTTGATGAAGACTGTGGAGGTTGTTAATAGATTCAGGGAGAGTCAGTTTGATGTGGTTAAGGCTGGATTGGCTTCGAATGGTGAAGTTGTTTCTATTAATCCTGTTTATGTCAAAGCTGGGGTTCCCTCCCAGGATGGGTTTGTGATGAATGTGCAGCCTTCGGAAGCCGAGGCTGGTTTTGATCTTAGGTTGACCCCTACGACGGACCCTGAGGAAATGAAGAGGAGAATCGCAGCAGAATGGGCGCCGGCTGTTAGAAATATGTCCTATGAGATAAAAGAGAAAGGACCCCTCAAAGACCACATGGGACGTCCCTTGATGACCGCAACTAATGACTCCAATCCATGGTGGTTAGTTTTCAAGCAGGCCATCACATCAGCTGGAGGAAAACTTTCAAGGCCTGAGATCCTTGCATCCACAACTGATGCTCGATACATTAGACAAAAAGGAATTCCTGTACTTGGTTTTTCCCCAATGAAAAATACTCCAATCCTGCTTCATGACCACAATGAGCACCTACGAGATACTGTATACTTGGAGGGAATACAGGTATACGAGTCTCTGATAAGTGCCTTGAGTTCATTTACAGAAGTCTCACAATAA 1362 0.533 MARTTTTTPHRHYFTFSLFLHLTLLLSLLPFSATTTTTTEQEQDNPITRFQRYLQINTAHPNPDYTSAVSYLITQASSINLRHKTLHFSPGNPLLLLTWPGSNPSLPSILLNSHLDSVPAEPSKWLHPPFSATRDPDTGAIFARGAQDDKCIAMQYLEAIRNLKSQGYAPARTVHISLVPDEEVGGFRGSAMFAESEEFAALSVGFALDEGQANPGDEFRVFYADRIPWEVKIKAKGRPGHGSKMYDDSAMENLMKTVEVVNRFRESQFDVVKAGLASNGEVVSINPVYVKAGVPSQDGFVMNVQPSEAEAGFDLRLTPTTDPEEMKRRIAAEWAPAVRNMSYEIKEKGPLKDHMGRPLMTATNDSNPWWLVFKQAITSAGGKLSRPEILASTTDARYIRQKGIPVLGFSPMKNTPILLHDHNEHLRDTVYLEGIQVYESLISALSSFTEVSQ* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5868 453 SUPERFAMILY Bacterial exopeptidase dimerisation domain 230 343 IPR036264 -
Lja1g5868 453 SUPERFAMILY Zn-dependent exopeptidases 38 445 - -
Lja1g5868 453 PANTHER AMINOACYLASE-1 25 451 - -
Lja1g5868 453 Gene3D Zn peptidases 36 230 - -
Lja1g5868 453 PIRSF ACY-1 36 450 - -
Lja1g5868 453 Pfam Peptidase dimerisation domain 229 332 IPR011650 -
Lja1g5868 453 PANTHER PUTATIVE-RELATED 25 451 - -
Lja1g5868 453 TIGRFAM Ac-peptdase-euk: N-acyl-L-amino-acid amidohydrolase 37 448 IPR010159 GO:0004046|GO:0005737|GO:0006520
Lja1g5868 453 Gene3D - 231 342 - -
Lja1g5868 453 CDD M20_AcylaseI_like 44 446 - -
Lja1g5868 453 ProSitePatterns ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 146 185 IPR001261 -
Lja1g5868 453 Pfam Peptidase family M20/M25/M40 110 443 IPR002933 GO:0016787
Lja1g5868 453 Gene3D - 367 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5868 Lja-Chr1 105586872 105602259 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5868 K14677 - gmx:100817383 671.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5868 1 105586872 105602259 Lja1g5868 1 105586872 105602259 ECH