Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5860 ATGGTAATGTGGGTATTTGGGTACGGTTCCTTGATCACCAAAGCAGGCTTCAAATACGATGAGCGTCTTGTTGGTTTCATCAAAGACTATCGTCGCGTCTTCTACCAAGGCTCTACTGATCACAGAGGAACCCCTGAGTTTCCTGGAAGAACTGTTACTCTGGAACCTGCTGAAGGAGAAATATGTTGGGGAGCTGCTTACAAGATCTCAAATAAGGAAGATCAAGAAATCGCATTAACGTATCTGGAAGTGAGAGAGAAGCAATATGACAAGAAGGAATATGTAGATGTTTTCACTGAGGTGAATGCTACAACGCCAGCGATTTCTGGGGCTTTGGTATATATAGCTTCTCCAAACAAAAAAGTTAACGTAAATTATTTAGGCCCTGCATCTGTTGAAGATATTGCAAGACAAATAGTTCAAGCTGAAGGACCCACAGGACCTAATAGAGAGTATCTTTTCCTACTTGAAAAGGCTCTCCTTCAAATAGGTTGCAAAGACAAGCATGTCATTGATCTTGCAAATGAAGTAAGGCGTATTATTTCAGAGGAGCCCTGA 558 0.4158 MVMWVFGYGSLITKAGFKYDERLVGFIKDYRRVFYQGSTDHRGTPEFPGRTVTLEPAEGEICWGAAYKISNKEDQEIALTYLEVREKQYDKKEYVDVFTEVNATTPAISGALVYIASPNKKVNVNYLGPASVEDIARQIVQAEGPTGPNREYLFLLEKALLQIGCKDKHVIDLANEVRRIISEEP* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5860 185 SUPERFAMILY Gamma-glutamyl cyclotransferase-like 1 120 IPR036568 -
Lja1g5860 185 PANTHER CATION TRANSPORT PROTEIN CHAC-RELATED 2 183 IPR006840 GO:0003839|GO:0006751
Lja1g5860 185 PANTHER GLUTATHIONE-SPECIFIC GAMMA-GLUTAMYLCYCLOTRANSFERASE 1 2 183 - -
Lja1g5860 185 Pfam ChaC-like protein 3 179 IPR006840 GO:0003839|GO:0006751
Lja1g5860 185 Gene3D - 2 183 - -
Lja1g5860 185 CDD GGCT_like 5 116 IPR013024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5860 Lja-Chr1 105181373 105185716 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5860 K22596 - fve:101301837 325.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5860 1 105181373 105185716 Lja1g5860 1 105181373 105185716 ECH