Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5857 ATGCAAAGTTCATCAGGGTCATTGTTGAAACAGTTGAGCATGAAAGAAGCTTGGAAATCAACATCAAACAGGTGGAGCACTGCAAATGACAAATACAACAACAGTGGGGGAGGCTGTGAAGCGAGTGTGAATCAGATGAAAGGTGTTGGAATGCATGGGAATGAGGAAAATGCTGGAACAGTGGTGAAGAAGAGAGTGATGGTGGTGGTGGATCACACTTCACATTCCAAGCATGCTATGATGTGGGCTCTCACTCATGTAGCAAATAAGGGTGATTTGCTCACTCTGCTTCATGTTGTGCCTCTTGACTCAGCTTCTGATTCTTCTTCTTCTTGTTCTGCACATCTTGTCAATTATCTCAGGTCCCTTTGCAGAGATTTCAAGCCTGAGGTGGAAGTGGAAGCACTTGTAATCCAAGGCCCAAAATTGGCCACAGTGATGAGCCAAGTGAAGAAGCTGGAGGTCTCTGTCTTGGTATTGGGCCAAAAGAAGCCATCTTATCTCTTCAGCTGCCTGTGTGGAAGCACAACTAGTAGCAGCTCTGAAGAGTTTGCTGAACATTGCATCAACAAAGCAGAATGCTTAACAATAGGAGTGAGGAAGAGAAGCCAAGGCACAAATGGCTACTTCATCAGCACAAGGTGGCAGAAGAACTTCTGGCTACTGGCCTAG 672 0.4568 MQSSSGSLLKQLSMKEAWKSTSNRWSTANDKYNNSGGGCEASVNQMKGVGMHGNEENAGTVVKKRVMVVVDHTSHSKHAMMWALTHVANKGDLLTLLHVVPLDSASDSSSSCSAHLVNYLRSLCRDFKPEVEVEALVIQGPKLATVMSQVKKLEVSVLVLGQKKPSYLFSCLCGSTTSSSSEEFAEHCINKAECLTIGVRKRSQGTNGYFISTRWQKNFWLLA* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5857 223 Pfam Universal stress protein family 64 178 IPR006016 -
Lja1g5857 223 CDD USP_Like 71 194 - -
Lja1g5857 223 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 64 178 - -
Lja1g5857 223 Gene3D HUPs 63 208 IPR014729 -
Lja1g5857 223 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 2 223 - -
Lja1g5857 223 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 2 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5857 Lja-Chr1 105145973 105147700 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5857 - - gmx:100816511 319.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5857 1 105145973 105147700 Lja1g5857 1 105145973 105147700 ECH