Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5856 ATGGAAGAAGGCCTTATTTGCCAGTGGAGCGTGTTTCGATCTCTCTTGGCAATCCTTCAATGGTGGGCTTTCAATGTCACTGTTATCATCATCAACAAGTGGATCTTCCAGAAATTGGATTTCAAGTTCCCGTTATCGGTATCCTGTATCCACTTTATTTGCTCAGCCATTGGAGGATATGTGGTGATTCAGGTGCTTAAGCTTAAACCACTGATAGCTGTTGAACCTGAAGATCGCTGGAGAAGAATATTTCCTATGTCATTTGTGTTCTGCGTTAACATTGTGCTGGGGAATGTGAGCCTACGATACATACCAGTTTCTTTTATGCAGACAATAAAGTCATTCACTCCTGCAACTACAGTTTTTTTGCAATGGCTGGTATGGAGGAAATATTTTGATTGGCGTATTTGGGCTTCTCTTATACCCATTGTTGGAGGGATTCTTGTGACATCTGTTACAGAGCTTAGTTTTAATATGTTTGGTTTTCTTGCTGCCTTATTTGGCTGTTTGGCTACATCTACAAAGACTATTCTTGCTGAGTCTCTGCTGCATGGATACAAATTTGACAGCATCAACACAGTTTATTACATGGCACCTTTTGCAACTATGATCCTGGCGGTACCTGCTTTGTTACTTGAAGGCAATGGAATCCTTGAGTGGCTAAGTATTCATCCATATCCTTGGATAGCCCTGATCATCATTTTCAGCTCTGGGGTCTTGGCGTTCTGCCTCAACTTCTCCATTTTTTATGTGATTCACTCCACCACTGCTGTAACATTTAATGTTGCTGGAAACCTAAAGGTTGCGGTTGCTGTTCTTGTTTCTTGGCTGATATTTAGGAACCCAATTTCATATATGAATTCTATTGGATGTGCCATAACTCTTATTGGATGTACATTCTATGGTTATGTTAGACATATGCTCTCACAACAGCCAGCAGTTCCGGGAACTCCTCGGACACCCAGGACCCCTAGGAGTAAGATGGAGTTGCTTCCTCTTGTAAATGATAAATTAGATGATAAGGTCTAA 1029 0.4121 MEEGLICQWSVFRSLLAILQWWAFNVTVIIINKWIFQKLDFKFPLSVSCIHFICSAIGGYVVIQVLKLKPLIAVEPEDRWRRIFPMSFVFCVNIVLGNVSLRYIPVSFMQTIKSFTPATTVFLQWLVWRKYFDWRIWASLIPIVGGILVTSVTELSFNMFGFLAALFGCLATSTKTILAESLLHGYKFDSINTVYYMAPFATMILAVPALLLEGNGILEWLSIHPYPWIALIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISYMNSIGCAITLIGCTFYGYVRHMLSQQPAVPGTPRTPRTPRSKMELLPLVNDKLDDKV* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5856 342 SUPERFAMILY Multidrug resistance efflux transporter EmrE 71 152 - -
Lja1g5856 342 Pfam Triose-phosphate Transporter family 15 301 IPR004853 -
Lja1g5856 342 PANTHER GDP-MANNOSE TRANSPORTER GONST5 1 328 - -
Lja1g5856 342 PANTHER SOLUTE CARRIER FAMILY 35 1 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5856 Lja-Chr1 105138496 105144308 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5856 1 342 Organic Solute Cotransporters AT1G77610 88.047 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5856 K15285 - gmx:100817042 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5856 1 105138496 105144308 Lja1g5856 1 105138496 105144308 ECH