Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5853 ATGAACCCCTACATTGTCTCCGTCATTTTCCCCATCCTCGCCTCCCTCCTCTTCCGCAAACCGCCCAAACACCGCGGCGTCACCCTCGACACCACCGCCACCACCGATGACTCCGAATCCGGCGTCACCGTTCGGAACGCGCGATTCGATGCTCCGGTGGTGACGGCGTGGGAGGGGGTGACGACGCTTGCAGAGCTTTTCGAGGAGGCGTGTAGGAAGCATGGGGAGAGGGCTTTGCTCGGCGCGCGCGAGGTGATTTCCAAGGAGGCGGAGGCGGGTTCCGACGGGAGAGTGTTCGAGAAGGTTCACTTGGGGGAGTACCGGTGGTTGTCGTACGACGCCGTTTTTGAAGCGGTTACGAGTTTTGCTTCTGGCTTGAAGGAGCTTGGGCATGGTAGGGAGGAGCGGGTTGCGATCTTTGCGGATACGCGGGAAGAGTGGTTCATTGCGCTGCAGGGTTGTTTCAGGCGAAATGTGACAGTTGTGACTATATATGCATCATTGGGAGAGGAAGCTTTATGCCACTCATTGAATGAGACAGAGGTTACAACGGTGATTTGTGCGCAAAAAGAATTGAAAACGCTTGTCAATATTAATGGACAGCTTGACTCAGTGAAACGTGTGATATGCATGGATGATGATATCCCATCTGTTGCCTCATCTGTTGAACATGGATGGACAATCACTTCCTTTGCTGATGTCAAGAGACTTGGTAAAGAAAATCCTGTTGATGCAGATTTACCTCTTTCAGCAGATGTTGCAGTTATAATGTATACGAGTGGAAGTACCGGATTACCTAAGGGTGTGATGATGACACATGGCAATGTCTTAGCTACAGTCTCTGCCGTGATGAATATTGTTCCTAACCTTGGGAAAAAGGATATATATCTAGCATACTTACCAATGGCTCATATCCTTGAATTAGCAGCTGAGAATTTGATGGCAGCTGTTGGGATAGCTATAGGATATGGGTCTCCATTAACCCTAACTGATACATCAAGCAAAATAAAGAAAGGTACAAAGGGGGACGCTACTGTGTTGATGCCAACTTTAATGGCAGCTGTACCAGCAATCCTTGATCGTGTTCGAGATGGAGTGTTCAAGAAGGTAAATGCAGCAGGAGGATTATCAAAAAGGTTGTTTTATTTAGCCTATGAACGAAGGTTGCGTGCAATTAACGGTAGCTGGTTTGGAGCATGGGGCTTGGAAAAGGCTCTCTGGAACTTTCTTGTGTTCAGAAAGGTCCAAGCAATTTTGGGTGGTCGTATCCGTTTTATACTGTCCGGTGGTGCTCCCCTTTCTGGTGATACTCAGCAATTCATCAATATTTGTTTCGGTGCTCCAATAGGTCAAGGATATGGTCTTACAGAGACTTGTGCTGGGGGGACATTCTCTGATTTTGATGATACATCTGTTGGCCGTGTTGGACCACCTCTGCCTTGCTCATTTATTAAGCTAATCGACTGGCCCGAAGGTGGATATTTAACTACTGACACACCAATGGCTCGTGGTGAAATTCTAATTGGTGGTCCAAATGTCACTCTTGGGTACTTCAAGAATGAAGAAAAGACAAAAGAATCATATAAGGTTGATGACAGAGGAATGAGATGGTTCTACACTGGTGACATAGGGAGAATTCATCGAGATGGTTGTCTTGAAATCATTGATCGTAAAAAGGACATTGTTAAGCTGCAGCATGGAGAATATGTCTCCTTGGGAAAGGTTGAGGCAGCTCTCGTTGTTAGCCCCTTTGTGGACAATATTATGTTGCATGCTGATCCTTTCCATAGTTACTGTGTGGCACTTGTGGTGGTTTCTCAGTCCACATTGGAAGAATGGGCTTCGAATCAAGGAATTTCGTATTTTGATTTGTCTGAACTTTGCACGAAAGAAGAAACTGTGAAGGAGGTGCATGCATCACTTGTTAAGGAAGCAAAGAAGGCTCGTTTGGAGAAGTTTGAGATTCCAGCAAAAATCAAATTGCTTTCTGACCCATGGAGTCCTGAGTCTGGCCTAGTCACTGCTGCTCTCAAGATCAAGAGAGAGACCATAAAAAAGGCTTTCAAAGAAGAACTTTCAAAGTTGTATACTTCATAG 2097 0.4621 MNPYIVSVIFPILASLLFRKPPKHRGVTLDTTATTDDSESGVTVRNARFDAPVVTAWEGVTTLAELFEEACRKHGERALLGAREVISKEAEAGSDGRVFEKVHLGEYRWLSYDAVFEAVTSFASGLKELGHGREERVAIFADTREEWFIALQGCFRRNVTVVTIYASLGEEALCHSLNETEVTTVICAQKELKTLVNINGQLDSVKRVICMDDDIPSVASSVEHGWTITSFADVKRLGKENPVDADLPLSADVAVIMYTSGSTGLPKGVMMTHGNVLATVSAVMNIVPNLGKKDIYLAYLPMAHILELAAENLMAAVGIAIGYGSPLTLTDTSSKIKKGTKGDATVLMPTLMAAVPAILDRVRDGVFKKVNAAGGLSKRLFYLAYERRLRAINGSWFGAWGLEKALWNFLVFRKVQAILGGRIRFILSGGAPLSGDTQQFINICFGAPIGQGYGLTETCAGGTFSDFDDTSVGRVGPPLPCSFIKLIDWPEGGYLTTDTPMARGEILIGGPNVTLGYFKNEEKTKESYKVDDRGMRWFYTGDIGRIHRDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALVVSPFVDNIMLHADPFHSYCVALVVVSQSTLEEWASNQGISYFDLSELCTKEETVKEVHASLVKEAKKARLEKFEIPAKIKLLSDPWSPESGLVTAALKIKRETIKKAFKEELSKLYTS* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5853 698 PANTHER BACTERIAL LONG-CHAIN FATTY ACID COA SYNTHETASE 23 697 - -
Lja1g5853 698 ProSitePatterns Putative AMP-binding domain signature. 256 267 IPR020845 -
Lja1g5853 698 Gene3D - 55 557 IPR042099 -
Lja1g5853 698 SUPERFAMILY Acetyl-CoA synthetase-like 58 696 - -
Lja1g5853 698 Pfam AMP-binding enzyme 101 565 IPR000873 -
Lja1g5853 698 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 23 697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5853 Lja-Chr1 105090877 105099098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5853 151 696 Acyl Lipid Metabolism Gene Families AT1G77590 78.571 0.0 911
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5853 K01897 - gmx:100803677 1156.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5853 1 105090877 105099098 Lja1g5853 1 105090877 105099098 ECH