Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5851 ATGGAGTTTCTTAATCAAATCTCACTTGTGTCTTTTATTGTACTACTTTTATCAAGTTCTACCACAATCTTGAACCCTGTAAATGCCGCTGAAAGTTGTAATTTCCCTGCCATCTTTAACTTGGGTGCTTCAAACTCGGATACTGGTGGCCTTGGTGCTGCCTTTGGAGAACTAAAGTCTCCAAAGTCACCGAATGGAGAGACTTATTTTCACAGACCTTCTGGAAGGTTCTCTGATGGTCGAATCATACTTGATTTTATAGCTGAAAGTTTTGGACTTCCCCATGTACATTCTTATCTTAATTCTCTGGGGGCCAACTATTCACAAGGTGCAAACTTTGCAACATACTCATCGACAATAAGAATACCGGAAAGTATAGTACCTAATGGGAAATTCAGCCCTTTCTCCCTTGGAGTTCAGGTAGCTCAGTTGAAAGATTTTATACCCAACACAAAATTTATTAGAAGTCAAGGAGGTATATTTGCAACGTTGATGCCTAAGGAAGAATATTTTTCCAAGGCTTTATACACATTTGATATTGGTCAAAATGATCTTACTGCTGGGTTTGTTAGTAAAGGGCTTCCACACCTAGTTCGTGCTTCTGTCCCAGATATAGTCAATACTTTCTCAGCACATATCAAGGACATATACAATTTAGGGGCTAGATCGTTTTGGATACACAACACAGGACCAATTGGTTGCTTCCCTTTTATTTTGACCACCTTTAAAGTTACTCTAAAAGATAGGTATGGTTGTTCTAAGCCACATAATGAAGTAGCTCAGTATTTCAATCAAAAGCTAAAGGAAGCTGTAGTTCAACTTCGTCAGGAGCTTCCTCAAGCTGCAATCACATATGTAGATGTATACTCTATTAAATATTCTTTCGTGAGCGATCCAAAAAAATATGGATTTGAACAACCACTTGTTGCTTGTTGTGGTAATGGAGGGTTCTACAACTTTAACAACAAGGTTTCATGTGGAGGGACTATGGACAACGGTAATCATGTGGGCGCATGTGAAAAACCATCTACTAGACCGATATGGGATGGGATTCACTATACTGAGGCAGCTAATAAGATTGTTTTTGATCAGATTTCTTCAGGAGCTTTCACGGATCCGCCAATTCCCTTGAATATGTCATGTCAAAGAACAAACTCGTCAATTAGGGAGAACTTGCATCATGTGAAACTGAACAAACAAGGATTTGGACTTTACCACGTGACATGA 1227 0.3904 MEFLNQISLVSFIVLLLSSSTTILNPVNAAESCNFPAIFNLGASNSDTGGLGAAFGELKSPKSPNGETYFHRPSGRFSDGRIILDFIAESFGLPHVHSYLNSLGANYSQGANFATYSSTIRIPESIVPNGKFSPFSLGVQVAQLKDFIPNTKFIRSQGGIFATLMPKEEYFSKALYTFDIGQNDLTAGFVSKGLPHLVRASVPDIVNTFSAHIKDIYNLGARSFWIHNTGPIGCFPFILTTFKVTLKDRYGCSKPHNEVAQYFNQKLKEAVVQLRQELPQAAITYVDVYSIKYSFVSDPKKYGFEQPLVACCGNGGFYNFNNKVSCGGTMDNGNHVGACEKPSTRPIWDGIHYTEAANKIVFDQISSGAFTDPPIPLNMSCQRTNSSIRENLHHVKLNKQGFGLYHVT* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5851 408 Pfam GDSL-like Lipase/Acylhydrolase 38 365 IPR001087 GO:0016788
Lja1g5851 408 PANTHER ESTERASE-LIKE ISOFORM X1 7 384 - -
Lja1g5851 408 CDD SGNH_plant_lipase_like 36 368 IPR035669 -
Lja1g5851 408 Gene3D SGNH hydrolase 25 369 IPR036514 -
Lja1g5851 408 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 7 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5851 Lja-Chr1 105034084 105041573 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5851 36 379 Acyl Lipid Metabolism Gene Families AT4G10950 27.684 4.75e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5851 - - tcc:18592336 487.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5851 1 105034084 105041573 Lja1g5851 1 105034084 105041573 ECH