Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5849 ATGGATAATTCGGATATCAACAGAGATGGTCACTACAATCGAACATACTCCTCCTTCTCCTGCTCCTCTCAGAGGGATGTCCGTTACAGCTGTGGCAACTGTGGTTATGAGCTGAACCTATCCTCCTCAAACCGAAACTTCTCATCCATAGGATCTAAATATGGGAAGTCCATAAGGCGAGGTATTATATCATTCTTCAATATTGATGATAGCAGATTTACCCGGGTTGATGAACTTCAGTGTGTGCCCCATTTTAGTAAGCACTCATGGGGCTTGTTCCGCCGAAGAACTAAGCTGCTTTGTCGCAAGTGCGGCAACCACATTGGAAATGCACACAATGGTTACACTTCATCCTTCCCTCTTGTGTCAGACGGAGCAGAATCATCTCCTGCCTCTGAAGCGGCCAGTCATATTAAATATGACATTCGCCTTCGTGCCTTACAACCTTCATCTTCTGAAGAATCTCGAATCCCTGTGTTTACTTGA 486 0.4506 MDNSDINRDGHYNRTYSSFSCSSQRDVRYSCGNCGYELNLSSSNRNFSSIGSKYGKSIRRGIISFFNIDDSRFTRVDELQCVPHFSKHSWGLFRRRTKLLCRKCGNHIGNAHNGYTSSFPLVSDGAESSPASEAASHIKYDIRLRALQPSSSEESRIPVFT* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5849 161 Gene3D Peptide methionine sulfoxide reductase. 2 118 - -
Lja1g5849 161 PANTHER - 3 159 - -
Lja1g5849 161 PANTHER METHIONINE-S-OXIDE REDUCTASE 3 159 IPR045282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5849 Lja-Chr1 105025272 105028293 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5849 - - gmx:100777814 259.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5849 1 105025272 105028293 Lja1g5849 1 105025272 105028293 ECH