Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5831 ATGTCAATCTTCGAGTACAATGGAAGTGCCATAGTCGCCATGGTTGGCAAGAACTGCTTCGCCATTGCCAGTGATCGCAGACTCGGCGTTCAGCTCCAAACCGTAGCCACCGATTTCCAAAGGATCTTCAAAGTTCACGACAAGCTCTTCATCGCTCTCTCTGGTCTCGCCACCGATGCTCAGACACTGTACCAGCGTCTCGTTTTCCGACACAAGCTTTATCAGCTTCGTGAAGAGAGGGATATGAAACCAGAGACCTTTGCAAGCTTGGTCTCTGCTCTTCTTTACGAGAAAAGGTTTGGTCCATACTTTTGCCAGCCTGTAATTGCCGGATTAGGGGATGAAGACAAACCATTCATTTGCACAATGGATTGCATTGGAGCAAAGGAGCTTGCAAAAGATTTTGTTGTTGCTGGCAGTGCATCTGAGTCTCTATACGGTGCTTGTGAGGCAATGTTTAAGCCTGACATGGAACCAGAGGAATTGTTTGAGACCATCTCCCAAGCACTGCTATCATCAGTAGATCGTGACTGTTTAAGTGGCTGGGGCGGGCATGTCTATGTCGTCACGCCAACTGAAGTGAAGGAAAGGATTTTGAAGGGAAGAATGGATTAA 615 0.4748 MSIFEYNGSAIVAMVGKNCFAIASDRRLGVQLQTVATDFQRIFKVHDKLFIALSGLATDAQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDEDKPFICTMDCIGAKELAKDFVVAGSASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5831 204 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 204 IPR029055 -
Lja1g5831 204 ProSitePatterns Proteasome beta-type subunits signature. 12 59 IPR016050 GO:0005839|GO:0051603
Lja1g5831 204 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 1 204 IPR029055 -
Lja1g5831 204 PANTHER PROTEASOME SUBUNIT BETA 4 198 - -
Lja1g5831 204 ProSiteProfiles Proteasome beta-type subunit profile. 8 189 IPR023333 -
Lja1g5831 204 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 4 198 - -
Lja1g5831 204 CDD proteasome_beta_type_3 6 200 IPR033811 GO:0019774|GO:0043161
Lja1g5831 204 Pfam Proteasome subunit 7 189 IPR001353 GO:0005839|GO:0051603
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5831 Lja-Chr1 104799435 104804045 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5831 K02735 - gmx:100499664 402.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5831 1 104799435 104804045 Lja1g5831 1 104799435 104804045 ECH