Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5805 ATGAGGTTTCTGCCTACACCATGCTCCATAGATGTTCTGAAAGCCTCTTCCTCTGTCAAAATCACCGCCCTCACACTCTTCTCCCTCACCCTCCTCCTCTTCCTCTTCACCCGTTTCTCCCCCACCACCAACTCCCCCCTCACCTTCTTCCTCCCCTCGGAGCAACAACCACCACTTCCTCCGCCTCCGCCGCCGCCGAGGGTCAAGGTCTTCCGCCTGCCTCCCCTGCCGCCGGTGGAGCGGATGGGGCTGGTTGACGAAAACGGCGTCATGACGGACAATTTCACCGTCGGAGACTCCGATCTCGGCTCTGTCGTGGACCTGCTGAGCTGGAAGAACGAGTCGCGAGGGGTTGTTGAGGAGGAGGGTGCGGCGGCGAAGGTGGTGGTGGAGAAGTTCAAGGTCTGCGATTCGGGAATGGTGGATTATGTGCCTTGTTTGGACAATGCGGAAGCGGTGGCGAGGTTGAATGGGAGCGAGAGAGGGGAGAAGTACGAGCGGCACTGCCCTGAGGAAGGGAAGGGTTTGAATTGCCTGTTGCCGAGGCCACTAGGGTACCGTGTGCCTATCCTTTGGCCTCAGAGCAGAGATGAGGTTTGGTTCAGTAATGTACCACATACACGTCTGGTTGAAGATAAAGGTGGCCAAAATTGGATATCAATAAAGAATGATAAGTTTGTTTTTCCTGGTGGTGGCACACAATTTATACATGGTGCAGATAAATACCTGGATCAAATTTCAGCGATGGTTCCAGACATTGCATTTGGTTCCAACACCAGAGTTGCTTTAGACATTGGATGTGGAGTGGCAAGTTTTGGCGCATTCTTGATGCAACGTAATGTCACTACTCTTTCAATAGCGCCGAAAGATGTTCACGAAAATCAGATTCAGTTTGCTCTTGAGCGTGGTGTGCCTGCACTTGCAGCAGTATTTGCTACACACCGTTTGTTGTTCCCAAGCCATGCATTTGACATGATACATTGTTCAAGATGCAGAATTAATTGGACTCGTGATGATGGAATTTTACTTCTTGAGGCCAACAGGCTCCTAAGGGCAGGTCGCTACTTTGTCTGGGCAGCGCAGCCAGTGTACAAACATGAAGAGAGCCTTCAAGAACAATGGAAAGAAATGGAGAACCTGACATCTCGACTTTGTTGGGAACTTGTACGGAAAGAGGGTTACATTGCTATATGGAGGAAACCTTTGAATAACAGCTGCTACCTTAGTCGTGACATTCCTGTGCATCCTCCATTATGTGAGTCCAATGATGATCCAGATGATGTTTGGTATGTCGGGCTTAAGGCATGCATCACTCAGTTACCTAGTGATGGATATGGAGTAAATGTTACCACGTGGCCGTCACGCCTTCATCAACCACCAGACAGGCTTCAAAGCATTAAACAGGATGCCATTATATCTAGAGTTGAGCTCTTCAGGGCCGAATCAAAATATTGGAATGAAATAATAGATAGTTATGTTCGGGCTTACCGCTGGAAGGAGTACAACCTGAGAAATGTAATGGACATGAGGGCAGGATTTGGAGGGTTTGCTGCAGCGCTGCATGATCTCCAGATTGACTGTTGGGTTATGAATGTTGTTCCTGTTAGTGGATTCAATACCTTGCCTGTTCTATATGACCGTGGGTTGATAGGAGTTATGCATGATTGGTGTGAGCCATTCGATACATATCCAAGAACATATGATCTTCTGCATGCAGCAGGTCTCTTTTCTGTTGAGAAAAAGAGGCAAAGATGTAATATCTCAACCATCATGCTTGAGATGGATCGGATGCTAAGACCAGGCGCAGGGCGTGTGTATATTCGTGACGCCATACATGTTATTAGTGAACTTGAAGAAATTTCAAGTGCAATGGGATGGGTGTGTACCAAGGATGATGTAGGAGAGGGTTCCTATGCAAGCTGGAAGATATTAAGGTGTGATAAACGCCTCTGA 1953 0.4823 MRFLPTPCSIDVLKASSSVKITALTLFSLTLLLFLFTRFSPTTNSPLTFFLPSEQQPPLPPPPPPPRVKVFRLPPLPPVERMGLVDENGVMTDNFTVGDSDLGSVVDLLSWKNESRGVVEEEGAAAKVVVEKFKVCDSGMVDYVPCLDNAEAVARLNGSERGEKYERHCPEEGKGLNCLLPRPLGYRVPILWPQSRDEVWFSNVPHTRLVEDKGGQNWISIKNDKFVFPGGGTQFIHGADKYLDQISAMVPDIAFGSNTRVALDIGCGVASFGAFLMQRNVTTLSIAPKDVHENQIQFALERGVPALAAVFATHRLLFPSHAFDMIHCSRCRINWTRDDGILLLEANRLLRAGRYFVWAAQPVYKHEESLQEQWKEMENLTSRLCWELVRKEGYIAIWRKPLNNSCYLSRDIPVHPPLCESNDDPDDVWYVGLKACITQLPSDGYGVNVTTWPSRLHQPPDRLQSIKQDAIISRVELFRAESKYWNEIIDSYVRAYRWKEYNLRNVMDMRAGFGGFAAALHDLQIDCWVMNVVPVSGFNTLPVLYDRGLIGVMHDWCEPFDTYPRTYDLLHAAGLFSVEKKRQRCNISTIMLEMDRMLRPGAGRVYIRDAIHVISELEEISSAMGWVCTKDDVGEGSYASWKILRCDKRL* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5805 650 Gene3D Vaccinia Virus protein VP39 240 400 IPR029063 -
Lja1g5805 650 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 166 389 IPR029063 -
Lja1g5805 650 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 480 609 IPR029063 -
Lja1g5805 650 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 76 649 IPR004159 GO:0008168
Lja1g5805 650 PANTHER METHYLTRANSFERASE PMT12-RELATED 76 649 - -
Lja1g5805 650 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 142 648 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5805 Lja-Chr1 103897670 103904090 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5805 - - lja:Lj1g3v0268500.1 1073.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5805 1 103897670 103904090 Lja1g5805 1 103897670 103904090 ECH