Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5803 ATGAAGGTAACATGGAAGAACAACAACAAGAAGCAAAAGCAACGTTGTTTACCCACCTTGTCACACTTCACTGATCCTCCATTTGAGCATCATCATCAACAGGACCAACCCCATTCACACCCTGAACAAGAAGAACATAGCGATGGAGTGCGTGCTGCTCCCAATCCTGATCAATCCTTGGAGGAAGCAAGACAATTGGCTAAGGAGTTTCAAGCTCAAGGAGACAACCTCGCTGTGGACGGAAAATATCGGGAAGCCCTAGGAAAATGGGAAGCTGCTCTTACATTGGCACCTGATATTCCAGTTTTGCACGAACAAAAGGCCCAAGTTTTACTAGAAATTGGAGATGCTTGGAATGCTTTAAAAGCTGCAACTCGAGCTACTGAATTGGAGCCATCATGGGCAGAGGCATGGGTCACACTTGGCAGAGCACAGCTGAATTTCGGTGAGCCAGATAATGCAATTGAAAGCTTTGACAGAGCGTTAGCTCTTAAGCCTGATTACCAGGAAGCTCGAGATGATAGGCAAACCGCATTACGCCTTGTAAAGAAGAGAAAGCAACTTCACTCGTCAGGCTTGAGTGATATTCAAAATCGTTATTCGGTTGGCGAGAAGGATGGAAGCTCATGA 630 0.4587 MKVTWKNNNKKQKQRCLPTLSHFTDPPFEHHHQQDQPHSHPEQEEHSDGVRAAPNPDQSLEEARQLAKEFQAQGDNLAVDGKYREALGKWEAALTLAPDIPVLHEQKAQVLLEIGDAWNALKAATRATELEPSWAEAWVTLGRAQLNFGEPDNAIESFDRALALKPDYQEARDDRQTALRLVKKRKQLHSSGLSDIQNRYSVGEKDGSS* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5803 209 MobiDBLite consensus disorder prediction 1 19 - -
Lja1g5803 209 SUPERFAMILY TPR-like 60 186 IPR011990 GO:0005515
Lja1g5803 209 MobiDBLite consensus disorder prediction 1 62 - -
Lja1g5803 209 SMART tpr_5 67 100 IPR019734 GO:0005515
Lja1g5803 209 SMART tpr_5 101 134 IPR019734 GO:0005515
Lja1g5803 209 SMART tpr_5 135 168 IPR019734 GO:0005515
Lja1g5803 209 MobiDBLite consensus disorder prediction 190 209 - -
Lja1g5803 209 ProSiteProfiles TPR repeat profile. 135 168 IPR019734 GO:0005515
Lja1g5803 209 ProSiteProfiles TPR repeat region circular profile. 135 167 - -
Lja1g5803 209 Gene3D Tetratricopeptide repeat domain 57 199 IPR011990 GO:0005515
Lja1g5803 209 MobiDBLite consensus disorder prediction 25 51 - -
Lja1g5803 209 MobiDBLite consensus disorder prediction 191 209 - -
Lja1g5803 209 Pfam Tetratricopeptide repeat 107 168 - -
Lja1g5803 209 PANTHER OSMOSIS RESPONSIVE FACTOR 1 206 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5803 74 179 EF-hand Containing Proteins AT2G32450 30.189 2.16e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5803 - - pvu:PHAVU_001G066600g 305.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5803 1 103842660 103846376 Lja1g5803 1 103842660 103846376 ECH