Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5781 ATGGTGAAGGAGAGAGAGTACTACGACATCCTCGCCGTCGCTCCCTCCGCCTCCGATTACCAAATTCGCAAGGCCTATTATCACAAGGCAAAGCAAGTTCATCCTGATCGAAACCCAAACGATCCTCATGCTGCTGAGAAGTTCCAGATTTTGGGCGAAGCGTACCAAGTGTTGAGTGATCCGGTGCAGAGGAACGCGTACGATCAAAATGGGAAGCATTCTGTGTCTAGAGAAACTATGCTTGACCCCACGGCAGTTTTTTCCCTGCTCTTTGGAAGTGAATTGTTTGAGGACTATATTGGGCATTTAGCTGTGGCATCTATGGCTTCTTCAGAACTTGCAGATGAAAGTGAGGATCCTGATAAGCTGCAGGAAAAGTTAAAGGCTGTCCAGAGAGAAAGGGAAGAAAAGCTAGCAAGATTTTTGAAAGATTTTCTTGGTCAATACGTCCGTGGTGACAAAAAGGGATTCTTCCAGCGCGCTGAGTCAGAAGCAAGACGGCTTTCTCATGGAGCTTTTGGAGTTGATATGTTACATACTATCGGCTATATATATTCAAGACAGGCAGCCCAAGAACTAGGGAAAAAAGCCATATATCTTGGAGTGCCATTTGTGGCTGAATGGGTTCGCAATAAAGGACATTTCTGGAAATCACAGTTCACAGCTGCTAAAGGTGCTTTTCAGTTACTTCAGCTTCAAGAAGACATTCGCAAGCAATTCAAAATGGATAGCAGTGGCCCTGAAAATGATATTGACTCTCATATTCGTCTTCATAAGGATACATTGATGAATTCCTTGTGGAAGTTAAATGTAGTGGATGTAGAAGTTACCCTTGGACACGTGTGTCAAATGGTACTCATGGAAAATAACGTTAAGAAAGAGGAACTCAAAGTTCGGGCTACTGCTCTTAAAATTCTTGGGAAGATATTTCAGGACAAGAATTCGAAAGAAGGAGAAACATTGAAAAAGAAAATGGCTGATGATTCTGATGACGAAGGAAGCAGTTCTGATTCTTCAGATGATGAATCGCCTAGAGCACTTACCTACCGGACTCCCTTTTTCACTCAGGGTATCGGTAGGCTCTTCAAATGCCTTTGTAATCCAGCATTTGATGTGGATGATGAAGAGATAGTTTACAAAAGCAAATGA 1149 0.4282 MVKEREYYDILAVAPSASDYQIRKAYYHKAKQVHPDRNPNDPHAAEKFQILGEAYQVLSDPVQRNAYDQNGKHSVSRETMLDPTAVFSLLFGSELFEDYIGHLAVASMASSELADESEDPDKLQEKLKAVQREREEKLARFLKDFLGQYVRGDKKGFFQRAESEARRLSHGAFGVDMLHTIGYIYSRQAAQELGKKAIYLGVPFVAEWVRNKGHFWKSQFTAAKGAFQLLQLQEDIRKQFKMDSSGPENDIDSHIRLHKDTLMNSLWKLNVVDVEVTLGHVCQMVLMENNVKKEELKVRATALKILGKIFQDKNSKEGETLKKKMADDSDDEGSSSDSSDDESPRALTYRTPFFTQGIGRLFKCLCNPAFDVDDEEIVYKSK* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5781 382 MobiDBLite consensus disorder prediction 320 345 - -
Lja1g5781 382 CDD DnaJ 6 60 IPR001623 -
Lja1g5781 382 ProSiteProfiles dnaJ domain profile. 6 71 IPR001623 -
Lja1g5781 382 Pfam DnaJ domain 6 68 IPR001623 -
Lja1g5781 382 Pfam X-domain of DnaJ-containing 131 323 IPR026894 -
Lja1g5781 382 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 366 - -
Lja1g5781 382 Gene3D DnaJ domain 1 86 IPR036869 -
Lja1g5781 382 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 366 - -
Lja1g5781 382 SUPERFAMILY Chaperone J-domain 2 101 IPR036869 -
Lja1g5781 382 ProSitePatterns Nt-dnaJ domain signature. 48 67 IPR018253 -
Lja1g5781 382 SMART dnaj_3 5 63 IPR001623 -
Lja1g5781 382 PRINTS DnaJ domain signature 26 41 IPR001623 -
Lja1g5781 382 PRINTS DnaJ domain signature 63 82 IPR001623 -
Lja1g5781 382 PRINTS DnaJ domain signature 43 63 IPR001623 -
Lja1g5781 382 PRINTS DnaJ domain signature 8 26 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5781 Lja-Chr1 102947049 102951074 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5781 22 81 Miscellaneous Gene Families AT1G16680 45.000 6.83e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5781 - - gmx:100793811 667.537