Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5765 ATGGATGTTGCACATTTCTTGTTCGGCATTTTTGGAAATGCTACTGGTCTTTTCCTCTTCTTGGCTCCAATAATCACATTCAAGAGGATAGTTATGAACAAATCCACAGAGCAATTCTCAGGAATCCCTTACATCATGACTCTGCTTAACTGTCTCCTTTCTGCTTGGTATGGTTTGCCATTTGTGTCTCCACACAACATACTTGTGACAATAATCAATGGAACAGGAGCAGGGATTGAAGTAATATACGTCTTCACCTTCATCTTGTTTGCACCCAAAAAGGAGAAAGCTAAAATTCTTGGCCTTTTCGTGGCTGTAACAGGGCTTTTCTCTGTTGTTGTTTTTGTCTCCCTGTTTGCACTTCATGGCAACTCCAGAAAGCTCTTCTGTGGCTTCGCTGCCGCTATTTTTTCCATCGTCATGTACGGCTCACCGCTTTCAATCATGAGACTGGTGATCAAAACCAAGAGCGTGGAGTTCATGCCCTTCTTCCTGTCACTGTTTGTGTTTCTCTGTGGTACTTCATGGTTCATTTTCGGATTGCTAGGCCGTGACCCATTTCTTTTTGTACCAAATGGTGTGGGTTCATTATTGGGTACAATGCAACTGATTTTGTATTTCATCTACCGTGGCAATAACAAGCGTGATGACAGCAGTACTAAGAAGAAGCCAACAACAACAACAAACGAAGCAGCAGAATCCATGGAAATGGGTACCGCAAAACCACCACCATTCAATGCAAATTGA 747 0.4257 MDVAHFLFGIFGNATGLFLFLAPIITFKRIVMNKSTEQFSGIPYIMTLLNCLLSAWYGLPFVSPHNILVTIINGTGAGIEVIYVFTFILFAPKKEKAKILGLFVAVTGLFSVVVFVSLFALHGNSRKLFCGFAAAIFSIVMYGSPLSIMRLVIKTKSVEFMPFFLSLFVFLCGTSWFIFGLLGRDPFLFVPNGVGSLLGTMQLILYFIYRGNNKRDDSSTKKKPTTTTNEAAESMEMGTAKPPPFNAN* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5765 248 MobiDBLite consensus disorder prediction 214 248 - -
Lja1g5765 248 Gene3D - 9 104 - -
Lja1g5765 248 Pfam Sugar efflux transporter for intercellular exchange 131 212 IPR004316 GO:0016021
Lja1g5765 248 Pfam Sugar efflux transporter for intercellular exchange 7 94 IPR004316 GO:0016021
Lja1g5765 248 Gene3D - 124 223 - -
Lja1g5765 248 PANTHER RAG1-ACTIVATING PROTEIN 1 4 240 - -
Lja1g5765 248 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 240 IPR018180 GO:0051119
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5765 Lja-Chr1 102517758 102520376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5765 1 190 Miscellaneous Gene Families AT1G21460 74.737 6.44e-102 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5765 K15382 - gmx:100799083 381.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5765 1 102517758 102520376 Lja1g5765 1 102517758 102520376 ECH