Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5764 ATGCCACCCCACCACCACTACCAATGCACCCGCACGCACCAGATCGGAGCCATACTCCTCGTCGCCGCCACCTTCTTCCTCACGCGGCTCTTAGACGCCCCTTGCACCCTCTCCACCACCACCGGCACCACCGTTCGCTCGTCACAGCACAACCTCCCTCAAGAACCATCCCTCAAGATCTACGTCTATGACGCCAGCGAGATCGACGGATTGAACGAGCTCTTGCGCGGAAGGGATGGTAAGATCACAGAGGAAGCTTGCTTGAAAGGCCAATGGGGCACTCAGGTGAAAATTCACAAGCTGCTGTTGCAATCAAGATACAGGACATGGAAGAAGGAGGAAGCTGATTTGTTCTTTGTGCCATCGTATGTGAAATGTGCGCGGATGATGGGCGGTCTTAACGACAAGGAGATTAATCACACCTATGTTAAAGTGATAAGCCAAATGCCAAATTTTCGGTTATCCGGAGGCCGAGACCATATCTTTGTCTTCCCCAGTGGTGCTGGAGCTCACTTGTTCAAATCTTGGGCGACATATATAAATCGCTCCATTATTCTTACCCCAGAGGGGGATCGGACTGATAAGAGAGATACTAGTGCCTTTAATACTTGGAAAGATATAATCATTCCAGGTAATGTTGATGATGGTATGACTAAAGCTGGATCTACAGTGGTCCAGCCTTTGCCTCTGTCAAAGCGGAAGTACTTGGCAAATTATTTAGGACGTGCACAAGGAAAAGCTGGTCGTCTTCGGCTAATAGAGCTTGCAAAACAGTTTCCGGAGAAGTTGGAATGTCCAGATTTGAAACTCAGTGGAGGTAGCAAGTTGGGAAGGAAAGAATATTTTGAACACCTGCGCAATTCCAAGTTTTGCCTCGCTCCACGTGGGGAGTCATCTTGGACGCTTCGCTTTTACGAGTCCTTTTTTGTGGAATGTGTTCCAGTTATAATATCAGATCAAATAGAATTGCCATTCCAGAATGTCATCGATTACAGTCAGATATCAATAAAATGGCCATCCAATCGAATAGGTCCTGAGCTACTGCAGTACCTGGAATCTATTCCAGATGAAATAATAGAAGCAATAATAGCTCGCGGTCGAAAAGTTAGGTGCTTTTGGGTCTATGCTTCCGATTCAGAACCTTGTTCGGCAATGCATGGAGTTATGAGGGAACTCCAGAGGAAAGTGAGACAATTTCACCAGTCAGCTGAAACATTTTGGCTGCACAATGGCTCGTTTGTAAACAGAAACTTGGTTGAATTTTCCAAATGGGAACTCCCTGTCTCTTTGCCTTGA 1296 0.4668 MPPHHHYQCTRTHQIGAILLVAATFFLTRLLDAPCTLSTTTGTTVRSSQHNLPQEPSLKIYVYDASEIDGLNELLRGRDGKITEEACLKGQWGTQVKIHKLLLQSRYRTWKKEEADLFFVPSYVKCARMMGGLNDKEINHTYVKVISQMPNFRLSGGRDHIFVFPSGAGAHLFKSWATYINRSIILTPEGDRTDKRDTSAFNTWKDIIIPGNVDDGMTKAGSTVVQPLPLSKRKYLANYLGRAQGKAGRLRLIELAKQFPEKLECPDLKLSGGSKLGRKEYFEHLRNSKFCLAPRGESSWTLRFYESFFVECVPVIISDQIELPFQNVIDYSQISIKWPSNRIGPELLQYLESIPDEIIEAIIARGRKVRCFWVYASDSEPCSAMHGVMRELQRKVRQFHQSAETFWLHNGSFVNRNLVEFSKWELPVSLP* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5764 431 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 5 420 IPR004263 GO:0006486|GO:0016757
Lja1g5764 431 Pfam Exostosin family 55 343 IPR040911 -
Lja1g5764 431 PANTHER EXOSTOSIN FAMILY PROTEIN 5 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5764 Lja-Chr1 102493696 102500126 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5764 - - gmx:100814029 737.643