Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5744 ATGGAACGGGTCAGGACGCAGAAACGGGTCCAAATTGAAGATCCCGACTCCGACCCTCCTCCCAGATACGACGACGTTTCCGCCGCCGCCGCCGACGAACCTGAAGAAGCGAAGGTTCGCTTCAAATCCTCCAACAGCAACGTCTCCGACGACCAAGAACCATTCATGGGCTTCAAGGTCCGTCGCAAAGCCTCTTTCCACAGAGACTACCAGGGTGATTACCTCGACGTCCCTTCACACCCATTTCTCATGAACATTTTGCACAAACAAGGTGACAGGCAGGTTCTATTTGCGGATAGGGTTTTAAAGTTCACTTGCTCCGGGAAGATGAAGCGTTGCGTTCTGTTGATCACTGATTTCGCTATTTATATCGTTGACCCTGAAGTGGACGCGCTTAAACGGAGGATAGCGCTTGCGGCAGTTGAGAGGGTTTGTCTCAGTGAACTGAGTGACAACTTCTTCGCGGTGATAATTCCGACGGAGTATGATTTGCTCATGGCAAGCACTCGAAAGTCTGAGATTGTTACCATGTTGGTTGAAGCTACCAAGTCCAAGAGCGCTTCTGATTTTGAACTCGACGTGGCTTTCTCGAACAGGTTTGAGTATAATGCCGCATCTGACGTGGTGAAGGAAATTCAATTTGAGGAAGTGGAAGGGGGTGTTAAAACAAGAATTTTGCGGAAGTGA 687 0.4934 MERVRTQKRVQIEDPDSDPPPRYDDVSAAAADEPEEAKVRFKSSNSNVSDDQEPFMGFKVRRKASFHRDYQGDYLDVPSHPFLMNILHKQGDRQVLFADRVLKFTCSGKMKRCVLLITDFAIYIVDPEVDALKRRIALAAVERVCLSELSDNFFAVIIPTEYDLLMASTRKSEIVTMLVEATKSKSASDFELDVAFSNRFEYNAASDVVKEIQFEEVEGGVKTRILRK* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5744 228 Pfam Unconventional myosin tail, actin- and lipid-binding 55 217 IPR010926 GO:0003774|GO:0016459
Lja1g5744 228 PANTHER OS01G0621700 PROTEIN 8 228 - -
Lja1g5744 228 ProSiteProfiles Class I myosin tail homology (TH1) domain profile. 59 228 IPR010926 GO:0003774|GO:0016459
Lja1g5744 228 MobiDBLite consensus disorder prediction 1 50 - -
Lja1g5744 228 MobiDBLite consensus disorder prediction 1 21 - -
Lja1g5744 228 PANTHER - 8 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5744 Lja-Chr1 101993516 102002672 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5744 - - aprc:113852809 346.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5744 1 101993516 102002672 Lja1g5744 1 101993516 102002672 ECH