LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja1g5711	ATGCCGTATTGCGACGTCGGAACAACGCAGCACCACTCATCACCTCCTTCCTCCTCCGCCGCCGTCGCACCCGCCGACGCCGTCAACCTCTACAATGACCTGAAGATATATTATAGAACTTACGGTCGTGGTCCCACCAAAGTGCTCCTCATCATTGGATTGGCAGCCACGCTTGAAGCATGGGGCCCACAAATCGAGGGGCTAACTGGCACCACCGTCCACAATGACGACAACGACGACGCCGTTTCGAGCGGAAATGACAATGATTCCGATGGTGGTGGAATCGAGGTTTGCGCGTTTGATAATCGGGGCGTGGGTCGGAGCTCCGTGCCGGCCGGAAAGTCCAATTACTCAACCAAGATCATGGCCAAGGATGCGGTTGCTTTGTTAGATCATCTGGGTTGGAAAAAAGCCCATGTTTTTGGGCACTCAATGGGAGCTATGATAGCTTGTAAAGTAGCAGCAATGGTTCCTGATAGAGTCCTCTCATTGGCATTGCTCAATGTAACAGGTGGAGGTTTTCAATGTTTTCCAAAGTTTGACCGGCGAACATTCTCCGTTGCTTACCGTTTCTTGAAAGCAAAGACTCCTGAACAAAGGGCAGAAGTTGACTTGGACACCCACTACTCACAGGAATATCTTGAGGAATATGTTGGAACTGTTAAGAGGAGAACGATATTATATCAGCAATATGTTAAAGGTATATCAAATTCTGGGATGCAATCTAATTATGGTTTTGACGGTCAACTCAACGCATGTTGGACACATAAAGTGACTCAAACAGAGATTGAGAGGATCAAATCAGCAGGTTTTCTTGTTTCAGTCATTCATGGCAGGTATGATATAATTGCTCAGATGTACTATGCACAAAGACTTGCTCAGAGGCTTTATCCAGCAGCTCGACTGGTAGATCTTCATGGAGGCCACTTAGTGAGTCATGAGCGGCCTGAAGAGGTTAATCAAGCACTGTTCGACTTGCTCAAGGCATCAAAAGGGAAGTCGGATCCACATGATTGGACTAATTTGTCAAATGCAGAGTCTTGGTGGAGAGGCAAAAGGTTGTCTTTTGTCAGAAACATCCAGGGGGGAAGCAACGTCTCCCTTAACTGCAGATTAGAAAACCTGCATCTCTTCCTATTATACTTATTTGGTCTCATTGTTATGGCATTTGAATATGGAAGAAAGCTTCTAGGAAGCTTCAAACCAGTTCGAGTTGGAAGTTCCTCCTCGTACATTGAAAGTCAATAA	1248	0.4623	MPYCDVGTTQHHSSPPSSSAAVAPADAVNLYNDLKIYYRTYGRGPTKVLLIIGLAATLEAWGPQIEGLTGTTVHNDDNDDAVSSGNDNDSDGGGIEVCAFDNRGVGRSSVPAGKSNYSTKIMAKDAVALLDHLGWKKAHVFGHSMGAMIACKVAAMVPDRVLSLALLNVTGGGFQCFPKFDRRTFSVAYRFLKAKTPEQRAEVDLDTHYSQEYLEEYVGTVKRRTILYQQYVKGISNSGMQSNYGFDGQLNACWTHKVTQTEIERIKSAGFLVSVIHGRYDIIAQMYYAQRLAQRLYPAARLVDLHGGHLVSHERPEEVNQALFDLLKASKGKSDPHDWTNLSNAESWWRGKRLSFVRNIQGGSNVSLNCRLENLHLFLLYLFGLIVMAFEYGRKLLGSFKPVRVGSSSSYIESQ*	416

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja1g5711	415	PANTHER	ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN	3	407	-	-
	Lja1g5711	415	Gene3D	alpha/beta hydrolase	30	335	IPR029058	-
	Lja1g5711	415	PANTHER	EPOXIDE HYDROLASE	3	407	-	-
	Lja1g5711	415	Pfam	alpha/beta hydrolase fold	85	314	IPR000073	-
	Lja1g5711	415	PRINTS	Epoxide hydrolase signature	94	109	IPR000639	GO:0003824
	Lja1g5711	415	PRINTS	Epoxide hydrolase signature	304	326	IPR000639	GO:0003824
	Lja1g5711	415	PRINTS	Epoxide hydrolase signature	140	153	IPR000639	GO:0003824
	Lja1g5711	415	PRINTS	Epoxide hydrolase signature	154	167	IPR000639	GO:0003824
	Lja1g5711	415	MobiDBLite	consensus disorder prediction	1	21	-	-
	Lja1g5711	415	MobiDBLite	consensus disorder prediction	71	90	-	-
	Lja1g5711	415	SUPERFAMILY	alpha/beta-Hydrolases	32	327	IPR029058	-
	Lja1g5711	415	MobiDBLite	consensus disorder prediction	71	93	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lja1g5711	94	334	Acyl Lipid Metabolism Gene Families	AT4G02340	22.878	6.35e-09	55.5

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja1g5711	-		-	gmx:100785963	609.757