Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5701 ATGGATGAGGAATGCTCTTCGGGATTAGCCTCGCACTCCAAGGTTATGGGAGAGAAGCGTGGTAGTACCCATTTGGGAGAGAATCATGACCACGCTCGTAAACGGATCAAAATGAAAGATCTTCAATCCATTGTTCACTCCGCGGAGACTAAATCTCGCGCCTCGGAATTTACGGACGATAAAGAAAACAGTGGTCAGAGTTCCTTTGGTGACAAAGAGATGTCACAAATTACTGAGGTCCCTGTAACTGTGGACATAAATGCTTCTGAAGAAGAGAAAACTCTGGATCTTAATACTGAAGCTTGCGGTGCCAGAGGTTTGTCTCTGGGTAAAAGTGATGAGAATCTTGCTAAAGAGTCGTTGTCTGAGAAGCAACAAGGTGGTAATTTTGTAAGCACAAGAGGAATTGATGTGGATCTCAATGCAGAAGATGATACTAGCTCTATAAATGTGGAACGTGGGGATTCTCACAAAGGATATGGCCGCCGCGTTAAGGCAAAGGATGTGTCTGAGAGTGGGAGCTGTATTGGACCTTTAGAAGAAAAAGATTCAATGAGAATATGGAAGGAGATGAAGCAAAATGGGTTTCTTTCATCCACCTATGGAGGAATCCCGATGCCGAAGCCACGTGGGAGGAAATGTAAAAATGAGATGCTTAAGAAAAAGATGGAAATCGCAAAGAGAGAACAGGTGAACAGATTTACAAAGATTGCGGCTCCGAGTGGACTGCTGAATGATCTAAACCCTGGAATTATTAATCATGTGAGAAACAGAAAACAGGTCCATTCAATTATTGAAGCTCTTGTAAGGTCTGAAAAGCATGAAAATAGCAGCTCAGGGAGCAAGCAAGCAACACATCGAATGAATGGAAGTATAGGAGTTAGCAAAAGGGACCTCGAGCATATGAATGATGCGGGTAAACATCAGCTTTCTTTTCCTCATGAAGAAGGGACCTTTCATTACTCTTCAGGGATTAGACAAGCACAAAAGGGTCCAGTGGCAATGAATGATTCCTCCTGCATTGTGGAGGACAATGTTTGTGACCACGACACAAATTCTATTGAGAAAGCCAGTCTTAAAAGTTGTGTATCAAAGACAAGCTATGTCACAGAAGATGATATTTTAACACTGAAATTGTCATCTTCGATGAAGGCATCAGGGAGTTCTACCAAATTTTCAAACGAGGAATCATCAAATGTCATGATGGTTTCCCCTCTTTCCCTAAAAGCTGCCACTGTTGCTTCACAATGGTTGGAGCTTCTACATCAAGACATCAAAGGTCGTCTTTCAGCTTTACGTCGCAGTAGGAAGAGAGTTCGATCTGTAATCTCAACTGAGTTACCTTTTCTTATATCGAAGGAATTTGCAAATAGCCAGGATTATGATCCTTATGCTGCGAACATGTCTGCTGGATTTCCCACTTGCAAAACAGCAGAATTGCATCGGGCTAGGTGGAGTGCTTTGTTTGATCATATGGATGAAGCACTTTCAGAAGAAGAAAAACAACTTGAAAGTTGGTTGAATCAAGTAAAAGAAAAGCAATTACTATGTGGTCAGGGTCTGCAACTTGTAAACTGGAGCAAGGTTTATGGTTTACCAGAGCTGGGAACTTCAGAAAATGACTCCAGAGTCTCACAATTAGATAGCTCGGAGAAAGAGTTAGCGGTTAATGCAGCTGCAGCTTCCATATATTCAACATGCAATTTTCTGTTGTCAGAGTTAACCTGCATGTGA 1734 0.4198 MDEECSSGLASHSKVMGEKRGSTHLGENHDHARKRIKMKDLQSIVHSAETKSRASEFTDDKENSGQSSFGDKEMSQITEVPVTVDINASEEEKTLDLNTEACGARGLSLGKSDENLAKESLSEKQQGGNFVSTRGIDVDLNAEDDTSSINVERGDSHKGYGRRVKAKDVSESGSCIGPLEEKDSMRIWKEMKQNGFLSSTYGGIPMPKPRGRKCKNEMLKKKMEIAKREQVNRFTKIAAPSGLLNDLNPGIINHVRNRKQVHSIIEALVRSEKHENSSSGSKQATHRMNGSIGVSKRDLEHMNDAGKHQLSFPHEEGTFHYSSGIRQAQKGPVAMNDSSCIVEDNVCDHDTNSIEKASLKSCVSKTSYVTEDDILTLKLSSSMKASGSSTKFSNEESSNVMMVSPLSLKAATVASQWLELLHQDIKGRLSALRRSRKRVRSVISTELPFLISKEFANSQDYDPYAANMSAGFPTCKTAELHRARWSALFDHMDEALSEEEKQLESWLNQVKEKQLLCGQGLQLVNWSKVYGLPELGTSENDSRVSQLDSSEKELAVNAAAASIYSTCNFLLSELTCM* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5701 577 Coils Coil 489 516 - -
Lja1g5701 577 MobiDBLite consensus disorder prediction 17 60 - -
Lja1g5701 577 MobiDBLite consensus disorder prediction 1 76 - -
Lja1g5701 577 PANTHER CATION-TRANSPORTING ATPASE 28 573 - -
Lja1g5701 577 PANTHER CATION-TRANSPORTING ATPASE 28 573 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5701 - - gmx:100808129 684.485