Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5694 ATGGACTCAGATTCAGATCATTTGGAAAACAGCGACCCCGGTTTTGTTTGGGATGAAAATTCACAGCTTTACTTCCACGCCAGTACTGGATTTTATCATGACCCTAATGCTGGCTGGTACTATAGCAGCAGCGACGGCGTTTATTACAAATTTGAGGATGGAAAATATGTGCCTTTAGGTTCCAATGAGGATGATTGTGAAGAAACAGTTCAGTGCAAGGAAACTACACCAGAAAATCCTCAGCAAATATGCGGTAACAACAATGGGGATTCCACTTCGTTCCTTGAAAGGGAATTTGATACTGGCCAACACACAGGAACCTTGGTTGATGAAGCATTTGATGATGATGCCATGAATTCCATGAGCAGTCCAGCTTGTGAAAATCCCCCTCCACCACCATCAGAATGGTTAGAGGACACGCTTATTGAACTTTACTTATCTGGCTACAACAACACAGCAGTTAGTGCAGCTGATACAGCAGCAGTGCCCTTCGAAACAGACAGTGAATATTACTGTAAGTTAGCAGTGGACGCTTACCACAATACTGATGAAGTGGAAAGGGAGTGGATCCCGGGCCCAGTGGATGATAATGTCATAGCTGATAATGAAGGTACTGTAGATGAAAGTGTAGCTTACAGTGATACTTATGAATTGGAAGAAGGTGAGTGGATCCCAGACTCAGAGGACGAAAATGGCATAGCTGATAGAAGTCCTATTGATGAAGGTATCTTGTTGGATGAAGAGAATTGGCGTGCTCAATATGGTCAGGTGACTGAATCAGGGAATGATCTGGTTTCAGAGTTTTCAATTGTGGACTTATGGGATTGGGAAATGGTTAGAGGATCCAAAAAAGATGGAAAGGATAATGCAGCAAGGTTGGTCGGAAGACTAGTGAAACAATCTGCAAAGCCACATCCATCCATCCGTTCTGGCAGAGGGAAGTTAAGATCTGCTCCTATCTGTGAAGTACATCTCGATCTGGTACGAGTCAAAACAGGTCAAGTGTACAAATTGCGAAATCCTAGTGCTAGCTATGTGGCTTCAATCTCAACTTATAATTCTGCCAATCCAACAAAAGATTGGGATTTTCCTCAGCTATCATCTAATAGAAATATCACTCGTTTCTCTAAGTCCAGTGAAGGTACTGGTACTGCTTCGACTTCAGATGAAACTCCTGTAGAGAAGGATTTGTCTCATCAAAGAGGGAGGATAGAATATTACAAGGAGAAAAATTGTTCTGAACTTATAGATCTCTTTTCTAACATGACCACCCATCAGATAGAAAATTTTGGTAAAATAAAAGGATTCCTTCAGAATCTGCTTGCCTTTAACTCATTTACTCTTTTGCTATGCCAGCAAATGATAAAACAACAATACAGAGATAGAGCTGCTGAAAGAAGAATCTTGCATGGTGGCTTTGGTGTGGATCCAGGACAGAAGAATCACGCCGTTCGTGATGATACAACATCATCGCCTGATGATTACTGTCCAGAAGAAGCTGCATCAGAGGCATTGCAGATGTCATTTGGAGCCGGTAGTTATGCCAGGAAACTTTTAGAAAACATGGGTTGGAAGGAGGGAGAAGGGCTTGGGAATTCAACCAAGGGCTTGGTGGAACCTATTCAACCGGTTGGAAACATCGGCAGTGCAGGTTTGGGATGGCCTCGTCGAAATTGA 1677 0.427 MDSDSDHLENSDPGFVWDENSQLYFHASTGFYHDPNAGWYYSSSDGVYYKFEDGKYVPLGSNEDDCEETVQCKETTPENPQQICGNNNGDSTSFLEREFDTGQHTGTLVDEAFDDDAMNSMSSPACENPPPPPSEWLEDTLIELYLSGYNNTAVSAADTAAVPFETDSEYYCKLAVDAYHNTDEVEREWIPGPVDDNVIADNEGTVDESVAYSDTYELEEGEWIPDSEDENGIADRSPIDEGILLDEENWRAQYGQVTESGNDLVSEFSIVDLWDWEMVRGSKKDGKDNAARLVGRLVKQSAKPHPSIRSGRGKLRSAPICEVHLDLVRVKTGQVYKLRNPSASYVASISTYNSANPTKDWDFPQLSSNRNITRFSKSSEGTGTASTSDETPVEKDLSHQRGRIEYYKEKNCSELIDLFSNMTTHQIENFGKIKGFLQNLLAFNSFTLLLCQQMIKQQYRDRAAERRILHGGFGVDPGQKNHAVRDDTTSSPDDYCPEEAASEALQMSFGAGSYARKLLENMGWKEGEGLGNSTKGLVEPIQPVGNIGSAGLGWPRRN* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5694 558 MobiDBLite consensus disorder prediction 372 398 - -
Lja1g5694 558 Pfam G-patch domain 513 553 IPR000467 GO:0003676
Lja1g5694 558 PANTHER D111/G-PATCH DOMAIN-CONTAINING PROTEIN 6 556 - -
Lja1g5694 558 PANTHER RNA-BINDING PROTEIN 6 556 - -
Lja1g5694 558 ProSiteProfiles G-patch domain profile. 511 557 IPR000467 GO:0003676
Lja1g5694 558 MobiDBLite consensus disorder prediction 372 391 - -
Lja1g5694 558 Pfam OCRE domain 14 58 IPR041591 -
Lja1g5694 558 SMART G-patch_5 509 555 IPR000467 GO:0003676
Lja1g5694 558 MobiDBLite consensus disorder prediction 471 492 - -
Lja1g5694 558 CDD OCRE 13 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5694 Lja-Chr1 100625586 100630126 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5694 - - gmx:100806477 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5694 1 100625586 100630126 Lja1g5694 1 100625586 100630126 ECH