Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5693 ATGGCTTCCCCTGCACATTTCGACGATGACTTCGATTTCGGAGGCGAAATTGGCGGAAGGCTTTCAGGTAGTAAGAGGCCATCTCCGGATTACGATGATGATGATTATGACAATGATCCTTTTGCACCCAAGAAGGCAAAATCAAAAGCTGAAGAAACTACCTCTGGTGTAACAACAGGAATGATCTTGTCACTTCGTGAGAGTCTTCAGAGCTGTAAGGATACGCTTGCAACATGCCAAAATGAACTGGAGTCTGCAAAATCTGAGATCCAGGGTTGGCATTCTTCAATTCAAAATGAGTCTGTTGTACCTACTGGGACCACTCCAGAGCCCAAAATGTTGATTAAATATCTTCAGGAGCTAAAATCCTCTGAAGTGTCTTTTAAAGAAGAGCTTGAAAAAGCGAAGAAAAAAGAATCAGCATTCATTGTAACATTTGCAAAACGGGAACAAGAGATAGCGGAGTTGAAGTCTGCTGTGCGGGATCTGAAAGCCCAACTCAAGCCGCCATCGATGCAGGCAAGGAGGTTGTTACTAGATCCAGCTGTTCATGAAGAGTTCAGACGTCTAAAGAACTTAGTGGAGGAAAAAGACAAAAAAGTAAAGGAGTTGCAAGATAACATTGCCGCTGTAAGTTTTACTCCCCAAAGCAAGATGGGGAAGATGCTGATGGCCAAATGCAGAACCTTGCAGGAGGAAAATGAGGAAATCGGAAACCAAGCTTCTGAGGGAAAGATTCATGAGTTGACAATGAAACTTGCTTTGCAGAAGTCCCAATGTGCACAATTTAGAAGTCAATTTGAAGGGTTGCAGAAGCACATGGAAGGTCTGACAAATGATGTGGAAAGATCCAATGAAATGGTTCTTACTTCTCCCTCCTTTCCTATTTTCATATTAAGCATAGCAGTGTATATTCAGTTTTAA 924 0.4221 MASPAHFDDDFDFGGEIGGRLSGSKRPSPDYDDDDYDNDPFAPKKAKSKAEETTSGVTTGMILSLRESLQSCKDTLATCQNELESAKSEIQGWHSSIQNESVVPTGTTPEPKMLIKYLQELKSSEVSFKEELEKAKKKESAFIVTFAKREQEIAELKSAVRDLKAQLKPPSMQARRLLLDPAVHEEFRRLKNLVEEKDKKVKELQDNIAAVSFTPQSKMGKMLMAKCRTLQEENEEIGNQASEGKIHELTMKLALQKSQCAQFRSQFEGLQKHMEGLTNDVERSNEMVLTSPSFPIFILSIAVYIQF* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5693 307 Coils Coil 69 89 - -
Lja1g5693 307 PANTHER PROTEIN OF 37 KDA-LIKE PROTEIN, PUTATIVE-RELATED 1 289 - -
Lja1g5693 307 Coils Coil 146 166 - -
Lja1g5693 307 Coils Coil 118 138 - -
Lja1g5693 307 MobiDBLite consensus disorder prediction 1 58 - -
Lja1g5693 307 PANTHER WILMS' TUMOR 1-ASSOCIATING PROTEIN 1 289 IPR033757 GO:0000381|GO:0005634|GO:0080009
Lja1g5693 307 Pfam WTAP/Mum2p family 134 288 IPR033757 GO:0000381|GO:0005634|GO:0080009
Lja1g5693 307 Coils Coil 187 207 - -
Lja1g5693 307 MobiDBLite consensus disorder prediction 26 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5693 Lja-Chr1 100617705 100624497 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5693 K22824 - gmx:100805415 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5693 1 100617705 100624497 Lja1g5693 1 100617705 100624497 ECH