Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5688 ATGGCTTTAGTAGCCCATCAACCTCAGGGTTTGTACATGATATCTCCCTCCAGGCATTTGTCATGGAGCGAAAGACTGAAGGTGAAGCAGCGTTTAACAAAACATCACATGATTGGAAGAGCAGACTTGCATCACCAATTAAAGCAAAATATTTGTTTAAGCGTGGGGCCTCCTTGTTTTGGCGTATCCAAGCTCAAGCCTTTAAGGATTTCAGGCTTCAAAGGCAGTACCCAAAATGATTATTCAGGAACCAGGGCTAATCGATGGAAAGCACCTAAGACTGCTATTCGACTAGAGGAGAGTGGTGAAGCTCACGATGTTCCACTATCTTATGCATCCGAAGCAAATGATAGCCTTGTGACATCATCTGCTATTCATAGACTTTTCAAGAAATGGCTGACAATGTTGGGCACACAACCATCAAGTCAAGAAGTGGAGAAAGTTTTTGCTCAACCAACTGCAGTGATTTCACCAGAAACTCTACAAGGTACTCATAGTAAGGAAAGAGTTGAGGTTTTGAAGGTGGCATGGTCTCATTTTCTGGCCATGGATGCAACAATGAAGATTCCTTTGTTGATATTTGTTCCTCTTTACATGGCTGTTAATGTAAAATATGGTGCTGAAGTTTCAAAGGAATTAACACCTTTATGGGTTTTGGGGCCACTAGTTGTGGCTATCTACATTATGATAATCCGTCGTCTGTGTGCACTCTATGCCTTCAGCTTCAATCAGACTGTCAAAATACTTAAGAATTCACCCTCTTACTGCATTTTGGCCTACAACTATGTTTTCTGCGGCAAGCTCAAAGAACATATTGCAGCTTATCTTTTGCAGCCTATATTGAGCATAAAAAATCTAGATTATAAACAGCTAACAAGTAGAAAATTGAAAGAGATTCAAGAATGGATATTGGAGAAGTACCTTGATTATGTGGAATCAATATGGCCATATTATTGTCGGACAATCAGATTTTTGAAGAGGGCTAATCTCATTTAG 996 0.3996 MALVAHQPQGLYMISPSRHLSWSERLKVKQRLTKHHMIGRADLHHQLKQNICLSVGPPCFGVSKLKPLRISGFKGSTQNDYSGTRANRWKAPKTAIRLEESGEAHDVPLSYASEANDSLVTSSAIHRLFKKWLTMLGTQPSSQEVEKVFAQPTAVISPETLQGTHSKERVEVLKVAWSHFLAMDATMKIPLLIFVPLYMAVNVKYGAEVSKELTPLWVLGPLVVAIYIMIIRRLCALYAFSFNQTVKILKNSPSYCILAYNYVFCGKLKEHIAAYLLQPILSIKNLDYKQLTSRKLKEIQEWILEKYLDYVESIWPYYCRTIRFLKRANLI* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5688 331 PANTHER DEFECTIVE 2759, PUTATIVE ISOFORM 1-RELATED 1 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5688 Lja-Chr1 100496793 100500680 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5688 - - gmx:100798149 517.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5688 1 100496793 100500680 Lja1g5688 1 100496793 100500680 ECH
Lja4g2298 4 25347283 25350252 Lja1g5688 1 100496793 100500680 PCT