Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5677 ATGGGGTCTGCGTTTAGTTCAGGGTTGAGCAAGGAAGAGATGGAAACGATGATGAATAAGGCTAAGGAGTTAGCTTCCTCTGCTCCTGTCTTTGTCTTCAGTAAGACTTACTGTGGTTACTGCAAGCGGCTCAAGGATCTCCTCACACAACTAGGAGCAACCTACAAGGTCATTGAATTGGATACAGAACGTGATGGAGATGGTATTCAATCAGCTCTAGCTGAGTGGACAGGTCAGAGGACGGTGCCAAACGTGTTCATTGGAGGAAAACACATTGGTGGTTGTGACACTGTTTTGGAGAAACACCGGGCAGGTCAATTGGTTCCCCTTCTCAATGACGCTGGAGCCATTGCCAATAACTCTGCTCAGCTCTGA 375 0.4773 MGSAFSSGLSKEEMETMMNKAKELASSAPVFVFSKTYCGYCKRLKDLLTQLGATYKVIELDTERDGDGIQSALAEWTGQRTVPNVFIGGKHIGGCDTVLEKHRAGQLVPLLNDAGAIANNSAQL* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5677 124 PANTHER GLUTAREDOXIN-C1 1 124 - -
Lja1g5677 124 SUPERFAMILY Thioredoxin-like 18 117 IPR036249 -
Lja1g5677 124 Gene3D Glutaredoxin 9 124 - -
Lja1g5677 124 TIGRFAM GRX_euk: glutaredoxin 30 110 IPR011899 -
Lja1g5677 124 CDD GRX_GRXh_1_2_like 29 110 - -
Lja1g5677 124 PRINTS Glutaredoxin signature 30 48 IPR014025 -
Lja1g5677 124 PRINTS Glutaredoxin signature 75 88 IPR014025 -
Lja1g5677 124 PRINTS Glutaredoxin signature 89 102 IPR014025 -
Lja1g5677 124 ProSiteProfiles Glutaredoxin domain profile. 18 118 - -
Lja1g5677 124 PANTHER GLUTAREDOXIN 2 1 124 - -
Lja1g5677 124 Pfam Glutaredoxin 30 92 IPR002109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5677 Lja-Chr1 100236672 100239789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5677 18 117 Miscellaneous Gene Families AT4G15700 38.000 2.15e-17 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5677 K03676 - qsu:111991481 207.608
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5677 1 100236672 100239789 Lja1g5677 1 100236672 100239789 ECH