Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5676 ATGGTTATGGCACAAGCTCTCTTCTCCACACTCACTTCTTCCCCTTCCTTCTTCTTCACTCACCACCGCGTTCCCTCTCCCAATCTCACCCTCCTCCGAACCCCGCCACTTCCCTCTCCGATTTCCCACCGTGTCTCCGCCGCCGTTTCCTGCAATGCTGGTGTCTCCTCCATTAAGTCCGTCCCTCAGCTAATTGAATCGTTGATTAATGGCGTTGACCTGTCGGAAACCGAAGCCGAAGCGTGTCTTGATTTGGTCTTGAATGAACCCAATGAGGCATTGATTAGCGCTGTTCTTGTGCTCTTGAGAGCAAAAGGGGAAACATTTGAAGAAGTTGTGGGGTTAGCGAGGGCTATGATGAAACATGCAAACAAGGTTGAAGGTTTGGTGGATGTGGTTGACATTGTGGGCACAGGAGGGGACGGGGCGAATACCGTTAATATTTCAACTGGGGCTTCCATTCTTGCTGCTGCTTGTGGGGTTAAAGTTGCAAAGCAAGGAAGCCGTTCGAGTTCTTCTGCGTGTGGAAGTGCTGATGTATTAGAAGCTTTGGGCGTGGTTATTGATTTGGGCCCTCAGGGGGTAAAAAAGTGTGTGAATGAAGCAGGAATTGGGTTCATGATGGCACCAAAGTATCACCCGGCAATGAAGATTGTCAGGCCTGTGAGAAAGAAGCTGAAAATAAGAACTGTATTCAATATATTGGGTCCCATGTTAAATCCAGCAGGGGCACCTTTTGCAGTTGTAGGAGTGTACACTGAGGACTTGGTCATCAAAATGGCTAAGGCACTTCATAGATTTGGCATGAAAAGAGCTTTAGTTGTCCACTCTGAAGGTTTGGATGAAATAAGTCCTCTTGGACCTGGTCTAGTGCTTGATGTTACTCCAGAAAAGATTGATAGGTTCTCATTCGATCCCTTGGATTTTGGCATTCCGCGGTGCAATCTTGAAAGCTTAAAAGGTGGTGACCCAGAATACAATGCAGCGATTCTGAAGCGTGTTCTAGGTGGGGAGATTGGGCCTATTGCAGATGCTTTGGTTCTCAATGCAGCAGCAGCTCTCTTGGTTAGTGGCTATGTAAGCAACCTAGCTGAAGGGGTGTCTATGGCGCGTGAAACACAACAATCAGGAAAGGCTCTCAAGACACTCAACTTGTGGAAGGATATCTCAAATAACATAAAAGATGTCGCAGACATGGAATATGCCTGA 1209 0.4731 MVMAQALFSTLTSSPSFFFTHHRVPSPNLTLLRTPPLPSPISHRVSAAVSCNAGVSSIKSVPQLIESLINGVDLSETEAEACLDLVLNEPNEALISAVLVLLRAKGETFEEVVGLARAMMKHANKVEGLVDVVDIVGTGGDGANTVNISTGASILAAACGVKVAKQGSRSSSSACGSADVLEALGVVIDLGPQGVKKCVNEAGIGFMMAPKYHPAMKIVRPVRKKLKIRTVFNILGPMLNPAGAPFAVVGVYTEDLVIKMAKALHRFGMKRALVVHSEGLDEISPLGPGLVLDVTPEKIDRFSFDPLDFGIPRCNLESLKGGDPEYNAAILKRVLGGEIGPIADALVLNAAAALLVSGYVSNLAEGVSMARETQQSGKALKTLNLWKDISNNIKDVADMEYA* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5676 402 Gene3D Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 127 399 IPR035902 -
Lja1g5676 402 Pfam Glycosyl transferase family, a/b domain 131 380 IPR000312 GO:0016757
Lja1g5676 402 SUPERFAMILY Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain 61 126 IPR036320 -
Lja1g5676 402 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE, CHLOROPLASTIC-LIKE ISOFORM X1 47 397 - -
Lja1g5676 402 Gene3D Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 63 126 - -
Lja1g5676 402 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE 47 397 IPR005940 GO:0000162|GO:0004048
Lja1g5676 402 Pfam Glycosyl transferase family, helical bundle domain 63 123 IPR017459 -
Lja1g5676 402 TIGRFAM trpD: anthranilate phosphoribosyltransferase 65 387 IPR005940 GO:0000162|GO:0004048
Lja1g5676 402 Hamap Anthranilate phosphoribosyltransferase [trpD]. 63 389 IPR005940 GO:0000162|GO:0004048
Lja1g5676 402 SUPERFAMILY Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 132 396 IPR035902 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5676 K00766 - gmx:100794615 566.229