Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5672 ATGAGTTTTCCAACAGGCTCTCCCAGAGGTTCTTGGCAGCCAACCATGACTGCTCAAACCAACAACCATAGTTACTGGCTGAACTGGAGATTTTTGCTTTCTTCCATCTTGGTTATGGTCTCAATCACCTTCTCATCAGTGCTGATATGGAAGCATGAACGTTTGAGAAGGATAGCGAGAAATGGCAGCAGGGAAATTCAAGAAGAAACATCAGCAACTTTGTATGAGGATGAAACTTGGAGGCCTTGTCTGAAAGGAATTCACCCTGCCTGGTTGATGGCTTTTAGAGTCTTTGCATTTTTTGTTCTTTTGGTGCTTCTCATAGTGAATGTTGTTGTTGATGGGGGAAGCATTTTCTACTATTATACTCAGTGGACTTTAACTTCAGTCACCATTTACTTTGGGCTTGGATCTTTGCTCTCTATGCATGGATGTTACCAACATCATAAGAAAGCGCGTGGGGATAAGGTTGATAATGTGGATGGAGATGCAGAGAAAGGAATGCATAATGCTCCTGCAATCCCTCCAGGTTCTAATGCATCTGACCAAGAGAAAAACTTGAAGGCCCCAGAAAAAGATCCTCTTCGCCAACTTGCGGGAACTTGGGGTTATATTTTTCAAATAATATTCCAGATCAATGCAGGTGCTGTTATGCTCACTGATTGTGTATTTTGGTTCATAATTGTTCCGTTTCTTACCATCAAAGATTACAATCTTAATTTTTTCATAGTCAGCATGCATACATTCAATGCGGTTTTCCTTATCAGTGATACAGCTTTAAATTGCTTGCGGTTCCCTTGGTTTCGAATCGGATACTTTTGCCTATGGACAGTCACATATGTGATTTTCCAGTGGATTGTTCATGCTTCCATTAATCTCTGGTGGCCATATCCATTTCTTGACTTGTCATCCTCATATTCTCCACTATGGTACTTTGCAGTGGCACTACTGCATATTCCTTGCTATTCTATTTTCCCTTTGGTGATGAAGCTGAAACACGATGTGTTTTCAACATGGTACCCTGACTCATATCAATGTGTTAGGTGA 1047 0.4097 MSFPTGSPRGSWQPTMTAQTNNHSYWLNWRFLLSSILVMVSITFSSVLIWKHERLRRIARNGSREIQEETSATLYEDETWRPCLKGIHPAWLMAFRVFAFFVLLVLLIVNVVVDGGSIFYYYTQWTLTSVTIYFGLGSLLSMHGCYQHHKKARGDKVDNVDGDAEKGMHNAPAIPPGSNASDQEKNLKAPEKDPLRQLAGTWGYIFQIIFQINAGAVMLTDCVFWFIIVPFLTIKDYNLNFFIVSMHTFNAVFLISDTALNCLRFPWFRIGYFCLWTVTYVIFQWIVHASINLWWPYPFLDLSSSYSPLWYFAVALLHIPCYSIFPLVMKLKHDVFSTWYPDSYQCVR* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5672 348 PANTHER PROTEIN, PUTATIVE-RELATED 10 348 - -
Lja1g5672 348 PANTHER UNCHARACTERIZED 10 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5672 Lja-Chr1 100189977 100193206 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5672 - - gmx:100799543 582.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5672 1 100189977 100193206 Lja4g2292 4 25295841 25299279 ECH
Lja1g1902 1 21773099 21778113 Lja1g5672 1 100189977 100193206 ECH
Lja2g0961 2 9046838 9052266 Lja1g5672 1 100189977 100193206 ECH
Lja4g2901 4 51673852 51687609 Lja1g5672 1 100189977 100193206 ECH
Lja1g5672 1 100189977 100193206 Lja1g5672 1 100189977 100193206 ECH