Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5625 ATGGGAATTGCAGAGGACGAGAGGGTCGTCGCTGTAATCATGGTTGGAGGACCCACTAAAGGTACTAGATTCCGGCCATTATCATTGAACATAGCCAAGCCACTTTTCCCATTAGCAGGACAACCCATGGTTCATCATCCCATTTCTGCTTGCAAAAGGATACCCAATTTGGCCCAGATTTATCTAATTGGATTCTACGAGGAACGCGAATTCGCATTGTATGTATCCTCCATCTCTACTGAGCTTAAAGTCCCTGTTAGATACTTGAAGGAAGAGAAGCCTCATGGTTCTGCTGGTGGTCTTTATAACTTCAGAGATCTGATCATGGATGACGATCCGTCACATATTTTCTTGCTGAACTGTGATGTTTGTTGCAGTTTTCCGCTGCTAGAAATGTTGGATGCTCACAAAAAATATGGTGGGATGGGAACAATACTAGTCGTGAAGGTTTCTCCCGAGTCAGCCAGCCAGTTTGGGGAATTGGTATCTGATCCAGTCACCAATGAACTCTTGCATTACACTGAGAAACCTGAAACTTTTGTAAGTGATCGAATAAACTGTGGTGTGTATATATTTACGCCAGATGTCTTTACTGCAATCGAGGGTGTTTCTACTCAGCGGAAAGACAGAGCTAATCTAAGACGTGTCTCCAGCTTTGAAGCAATGCAGCCTGACACAAGGAGTCTTCCTTCCAATTATGTCAGATTGGATCAAGATATCCTCACACCTCTTGCAGGGAAGAAACAACTGTATATATATGAAACCATGGACTTTTGGGAACAAATCAAAACTCCCGGAATGTCCATAAAATGTTCGTCCTTGTACCTTTCCCAATTTCGTTACACTGCCCCCCACCTATTAGCAAGTGGAGATGGTATTAAGAAATCCTGCATTGTAGGTGATGTTTATATTCATCCATCAGCAAAAGTGCATCCGTCTGCAAAGATTGGTCCGAGTGTATCAATTTCTGCAAATGCTCGTATTGGAGCTGGTGCAAGGCTTATCAGTTGTATCGTCCTTGATGATGTTGAGATCAAGGAGAATGCTGTTGTCATTCATGCAATTGTTGGATGGAAATCCTCTATTGGACGATGGTCTCGTGTCCAGGCTAGCGGAGATTACAATGCAAAACTCGGGGTCACTATACTTGGTGAATCTGTTACCGTTGAGGATGAAGTAGTGGTTGTTAATAGTATTGTTCTTCCGCATAAGACCCTAAATGTTGGCGTTCAAGATGAGATTCTTTTGTAG 1251 0.4293 MGIAEDERVVAVIMVGGPTKGTRFRPLSLNIAKPLFPLAGQPMVHHPISACKRIPNLAQIYLIGFYEEREFALYVSSISTELKVPVRYLKEEKPHGSAGGLYNFRDLIMDDDPSHIFLLNCDVCCSFPLLEMLDAHKKYGGMGTILVVKVSPESASQFGELVSDPVTNELLHYTEKPETFVSDRINCGVYIFTPDVFTAIEGVSTQRKDRANLRRVSSFEAMQPDTRSLPSNYVRLDQDILTPLAGKKQLYIYETMDFWEQIKTPGMSIKCSSLYLSQFRYTAPHLLASGDGIKKSCIVGDVYIHPSAKVHPSAKIGPSVSISANARIGAGARLISCIVLDDVEIKENAVVIHAIVGWKSSIGRWSRVQASGDYNAKLGVTILGESVTVEDEVVVVNSIVLPHKTLNVGVQDEILL* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5625 416 CDD M1P_guanylylT_A_like_N 11 275 - -
Lja1g5625 416 Pfam Nucleotidyl transferase 11 211 IPR005835 GO:0009058|GO:0016779
Lja1g5625 416 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 7 416 - -
Lja1g5625 416 PANTHER ADP-GLUCOSE PYROPHOSPHORYLASE FAMILY PROTEIN 7 416 - -
Lja1g5625 416 Gene3D Hexapeptide repeat proteins 288 411 - -
Lja1g5625 416 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 3 278 IPR029044 -
Lja1g5625 416 SUPERFAMILY Nucleotide-diphospho-sugar transferases 10 358 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5625 Lja-Chr1 98575287 98580484 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5625 K00966 - gmx:100817201 748.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5625 1 98575287 98580484 Lja1g5625 1 98575287 98580484 ECH