Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5620 ATGCAATCCATGTCGCTGACCCTGACCAAGAGGCTCTCTAATTCGAAGCCTCTCTGTAGATTCTCCTCCAACCTCGCCGCCTACTCAACCACCACCACCTCCCCTCCGCCGCCGTCACCTCCGATCTCCGCCGCCGCCAACGGCATCGCCTCCCCTCCCTCCTCTCTCTTCACCGGTCCATGGTCCGCCACTCAAACCCGTGGAATCACGCTCTCTGGATCTGATGTTAGAGTTGGGAATCTCATTGAAAACCGAGGGCGCGCTTACGAGGTTCTTAAATCATATCAGTCTCATGAAGGAATGGGAAAAGCTGCTAGCAAGGTTCTACCTCATAGTGTAGCTGGTTATGCCACAGCTGCTACTGCAGCGGGTGAGATCCAAAGCAAGGTACGTAGCAGTGGACTGAGGAGTCAAGGCCCGATGTCAAAGAGAGAGCAGCTCCTAAAAGTTTCTGCAGTTGCCTCCCTTCTTTTATTATACCCAAATGCCTATTCGTTGCTTGTAGCAAATTGCTTTGTATTCTGGCACACTCATGCGGGGATCGAAGAGATTTTAGCAGATTATGTTCACCATGAAGTGACCCGAGAGTTTGTTTCGATCTCTCTCAGATTGTTCCTGATAATTGCAATGAAGGATGTGTTCTTAAATTTGATTTTTGTATAA 663 0.4947 MQSMSLTLTKRLSNSKPLCRFSSNLAAYSTTTTSPPPPSPPISAAANGIASPPSSLFTGPWSATQTRGITLSGSDVRVGNLIENRGRAYEVLKSYQSHEGMGKAASKVLPHSVAGYATAATAAGEIQSKVRSSGLRSQGPMSKREQLLKVSAVASLLLLYPNAYSLLVANCFVFWHTHAGIEEILADYVHHEVTREFVSISLRLFLIIAMKDVFLNLIFV* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5620 220 Gene3D Fumarate reductase/succinate dehydrogenase, transmembrane subunit 141 215 IPR034804 GO:0016020
Lja1g5620 220 PANTHER SUCCINATE DEHYDROGENASE SUBUNIT 4, MITOCHONDRIAL 2 219 - -
Lja1g5620 220 PANTHER SUCCINATE DEHYDROGENASE SUBUNIT 4, MITOCHONDRIAL 2 219 IPR044963 GO:0005743|GO:0005749|GO:0006099|GO:0006121
Lja1g5620 220 SUPERFAMILY Fumarate reductase respiratory complex transmembrane subunits 154 210 IPR034804 GO:0016020
Lja1g5620 220 MobiDBLite consensus disorder prediction 28 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5620 Lja-Chr1 98501006 98505952 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5620 - K25801 lja:Lj1g3v0415980.1 261.536