Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5616 ATGGCTGCAGGTGAGGGCATAGAAATGAAAGCAGATCAGATTGAGAAGGCATTTTCTACTGCCTGGAAGGCTCACAAGTCACCAGAAAAGCATTACCTTGTTGAAAAGAACACCAGAGTCAACCCTTCAGAAGTCATCATCAGCTTTCCAGCATCAGGTTCTGTCAAGGATTGGTATTCTGGAACAACCTTTGGGGAAACCAAAATAGATCTTAAACTATTTCCCTCACTTAAAAGCATTGGAAACAATGAAGCTGCTAAAGTCAATGAAGCCTTTCTGAAAAGATTCCAAGACATTCTGGACAAATCCGCATTTAAAGATGAGGTAGACAAAGCAATGAGCAAACAAAAGAAAATAGTGTTTACAGGACACTCCTCTGGTGCTCCAATGGCCATTCTTGCATCCCTCTGGACCTTGGAGAAGTACCTAACACCAAAATCTCATAGAGAGATCCCTCTCCTCTGTGTAACTTCCGGTTCTCCCTTAGTTGGCAATCACATATTTTCTCACGCCACTGCGCGAGAAAACTGGTCTCGCTATTTCTTTCATTTTGTCATGAAGCATGACATAGTGCCAAGAATTCTCCTTGCTCCTCTCTCTTCCTTGGACCAAAGCCTTGAACCAGTTTCACAGTTCTTCAACCCCAAATCCAAATCTTTCATGAACGAGTCCATTGGAAGAGTTACAGAAGCTTCAGATTTCTACTTTGCCGTGATGTCAAGTGCTGCATCTGTCACGAGCCATGCTGCGTGCAAGCTAATGGGCACGACGGATGCAGCACTTGAAACACTGGCAAATTTTTTTCCAATGAGCCCTTACAGGCCCTTTGGAACTTACATTTTCTGCATTGCAAATGGAAAGGAAGCAAAGCAAATTGTCGTAAGAAACCCAGATGCGGTTCTGCAGCTCTTGTTTTTCTCTGCTCAGATAAACACTGAAACTGAAGCTGATCAAGTTCCCTATAGAAGCCTGCGAGAACATGTCATCAATGATACTGAACTGCAACAAACGTTAAGAATGCAGAATGTTGTGTACTTGGATCAACTGGGGAAGCTTCCTTTGCCTGAGGATAGTTCAAGTGGTGACACTGCAGAGATTAACATGGCCTTAAATGACCTTGGCCTGAGCACAAGAGCAAGACTGTGCCTTCGAGCAGCAGGGGAGTCAGAGGCAAGGAAACGGGACAACGAGGAAGTAATAAAAAAGAAGAAAGCCTTTGTTGAGGAAAGAATGAAGAAACTGGATGAGTACAGAGAAACAAAGTCACTCCAGAAAGTAGGGTACTACGACAGCTTCAAGATCCAAGATGACATAGAGGACTTCTCAGCAAACGTGACGAGGCTAGAGCTTGCAGGGGTGTGGGATGAGATAATTGAAAAGCTAAGAAGTTACGAACTCCCAGACGAGTTCGAAGGCAACAAATATTGGATAGAGCAAGGAACAAGGTTTCGCCGACTCGTGGAGCCGCTGGACATAGCTAACTACTACCGCCACCCGAGGGAAGGGGCTTACATGGATAAGGGAAGGCCAAGACGTTACAGGTACGCGCAGAGGTGGTTGGAGCATTCGCAGGGGAGAACGGAGGAAGCTATCTCGGAGTCTTGCTTCTGGGCTGAGGTGGAGGATCTTTGGAACATGGCAACAAGTGACAAGAAATGTTCTTTTGAGAATGTAAAGGAAAGGGTTGTGAGAGTAGAGGAGCAGATAAGAGTATGGATTGGGAAGGGTGAATTAGGTAACGATGTGTTCTTGGAGGGTTCTACCTTGGTGAAGTGGTGGAAGTTTCTGCCTTGGCAGCACAAGCAATATTCATGCATTAGAAGTCTTGTTGAACCATGA 1839 0.4508 MAAGEGIEMKADQIEKAFSTAWKAHKSPEKHYLVEKNTRVNPSEVIISFPASGSVKDWYSGTTFGETKIDLKLFPSLKSIGNNEAAKVNEAFLKRFQDILDKSAFKDEVDKAMSKQKKIVFTGHSSGAPMAILASLWTLEKYLTPKSHREIPLLCVTSGSPLVGNHIFSHATARENWSRYFFHFVMKHDIVPRILLAPLSSLDQSLEPVSQFFNPKSKSFMNESIGRVTEASDFYFAVMSSAASVTSHAACKLMGTTDAALETLANFFPMSPYRPFGTYIFCIANGKEAKQIVVRNPDAVLQLLFFSAQINTETEADQVPYRSLREHVINDTELQQTLRMQNVVYLDQLGKLPLPEDSSSGDTAEINMALNDLGLSTRARLCLRAAGESEARKRDNEEVIKKKKAFVEERMKKLDEYRETKSLQKVGYYDSFKIQDDIEDFSANVTRLELAGVWDEIIEKLRSYELPDEFEGNKYWIEQGTRFRRLVEPLDIANYYRHPREGAYMDKGRPRRYRYAQRWLEHSQGRTEEAISESCFWAEVEDLWNMATSDKKCSFENVKERVVRVEEQIRVWIGKGELGNDVFLEGSTLVKWWKFLPWQHKQYSCIRSLVEP* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5616 612 Pfam Enhanced disease susceptibility 1 protein EP domain 412 607 IPR041266 -
Lja1g5616 612 Gene3D alpha/beta hydrolase 9 238 IPR029058 -
Lja1g5616 612 Pfam Lipase (class 3) 48 194 IPR002921 GO:0006629
Lja1g5616 612 PANTHER PROTEIN EDS1-RELATED 3 610 IPR044214 GO:0006952
Lja1g5616 612 SUPERFAMILY alpha/beta-Hydrolases 41 198 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5616 Lja-Chr1 98400615 98404734 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5616 112 195 Acyl Lipid Metabolism Gene Families AT3G07400 33.721 2.10e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5616 K18875 - gmx:100819703 756.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5616 1 98400615 98404734 Lja1g5616 1 98400615 98404734 ECH