Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5615 ATGGCTGGTGGGTCACTTGGAGATAACATAGGATTGAAAGAAGATGTTCTCAAGAAGGCATGTAGTTTGGCTTTCAAAGCTTACAAGTCACCAAAGGAGCTCTTTGTGAAAACTTCCATAGATAGTTATGTAATTTTCAGCTTCCCTGGATCATGGGTTGTCTCTGACTGGTTTGTTGAAGGTAAACCATTTGGGGATACTCAGGTAGATCTTGCTGTCTTCCCTTCACTTAGAAGTGTTGGTAATGATGAAGCTGCTTTGGTCAACGAAGCCTTTCTCAAGAGATTCGATCACATACTGAAACATTCCACACTGAAATCTGAGGTGAATAAAGCTGTGGTAGAAGGGAAGCAGATAGTGTTTACAGGACACTCTTCTGGGGCTGCAATTGCCATTCTTGCAACATTTTGGGCCTTGGAAGAGTACCTTAACCCAACCAAAAGCCAAAAACACAAGCCTCCACACTGTGTTACTTTTGGGTCTCCCTTAGTTGGTAATCACATATTCTCTCATGCTTCAAGGAGAGAAAATTGGTCACGCTACTTCATCCACTTTGTTTTGAGATTTGACATTGTCCCACGGATTTTGCTTGCTCCATTCTCATCTATTGAACAAAGTTTTAGTCATATTCTCCAATTATTGACTCCCAAGTCCAAACCTTCTTCCCAAGATTCAGTAAGAAGCAGTTTGACTTCTGAGTTTTACTCCACTGTGATAGGGAATGCATCAACTGTTACAAGCCATGCTGCCTGTAAACTCATGGGGAGCACAAATTTGTTGCTGGAGGCAGTGACAAATTTTGTTGAGTTAAGCCCTTATAAGCCCTTTGGAACCTTCATATTTTGCAATGGTAATGGACAGTTGATTGTGGTGAGAAACTCAGATGCCGTTCTGCAACTCTTGTTCCACACTGCTCAGCTCAGTAATTACACAGAACTTTCTGAAGTTGCCAGCAAAAGCATTCTGCAACATCATGCCTATGAAGCTGAATTGGAGGATAGCTTGGGAATGCAAAATGTGGTGTACTTGGACAAACTTGATGTCCTTCCCTTGTCTGCTAATGGATCTAATGGTGATATTGCAACAATTAGCACAGCCTTGGATGGCCTTGGACTGAGTACTAGAGCAAGACTATGCCTTAGAGCAGCTGGTGAGTTGGAAAACCAAAAAGCCAGAAATGAAATGAAAATCTTGAAGGAGATTGAGAGCAAATCTGTGGAGAGCATGAAGGAAATGGAAGAGTACAAAGCAACATGTCAGTTACAGAATGGTTACTATGACGCCTTCAAGGTGCAAAAGGAGGCAAAGGACTTCCAAGCAAATGTGAAGAGGCTTGTGCTGGCAGGAGTTTGGGATGAGCTCATTGAGATGCTTAAGAGGTATGAACTTCCAGATGAGTTTGAAGGCAAATTAGAATGGATTCAACGCGGAACCAGCTTTCGCTTCCTGGTGGAGCCTCTTGATATCGCCAACTACTACCGCCATTTGAAGAATGAAGACACAGGACCTTACATGATCAGGGCCAGGCCAAAGCGATATCGGTACACACAGAGATGGTTAGAGCATGCCAAGAGGGTGCCAAAAGAAGAAATCTCAGAATCCACCTTCTGGGCTGAAATGGAAGAGCTATGCAGCTGGATTAGTAACAAGAAACCTTTTGAAGATGTGATGGAAAGGGTTCTCCAACTTGAACAAAACCTTAAGAAATGGACTGAATCTGATAAAGGGGAACTTAAAAAGGAGGTGTTCTTAAAGGATCCTACCTTCATAAAGTGGTGGGAAAATCTGCCTCAGGAACACAAGGCAAAATCCTGCATCTCCTCTCTGGTTCAGGTGTAA 1839 0.4285 MAGGSLGDNIGLKEDVLKKACSLAFKAYKSPKELFVKTSIDSYVIFSFPGSWVVSDWFVEGKPFGDTQVDLAVFPSLRSVGNDEAALVNEAFLKRFDHILKHSTLKSEVNKAVVEGKQIVFTGHSSGAAIAILATFWALEEYLNPTKSQKHKPPHCVTFGSPLVGNHIFSHASRRENWSRYFIHFVLRFDIVPRILLAPFSSIEQSFSHILQLLTPKSKPSSQDSVRSSLTSEFYSTVIGNASTVTSHAACKLMGSTNLLLEAVTNFVELSPYKPFGTFIFCNGNGQLIVVRNSDAVLQLLFHTAQLSNYTELSEVASKSILQHHAYEAELEDSLGMQNVVYLDKLDVLPLSANGSNGDIATISTALDGLGLSTRARLCLRAAGELENQKARNEMKILKEIESKSVESMKEMEEYKATCQLQNGYYDAFKVQKEAKDFQANVKRLVLAGVWDELIEMLKRYELPDEFEGKLEWIQRGTSFRFLVEPLDIANYYRHLKNEDTGPYMIRARPKRYRYTQRWLEHAKRVPKEEISESTFWAEMEELCSWISNKKPFEDVMERVLQLEQNLKKWTESDKGELKKEVFLKDPTFIKWWENLPQEHKAKSCISSLVQV* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5615 612 PANTHER PROTEIN EDS1-RELATED 1 611 IPR044214 GO:0006952
Lja1g5615 612 CDD Lipase_3 44 210 - -
Lja1g5615 612 PANTHER ENHANCED DISEASE SUSCEPTIBILITY PROTEIN 1 611 - -
Lja1g5615 612 SUPERFAMILY alpha/beta-Hydrolases 42 200 IPR029058 -
Lja1g5615 612 Pfam Lipase (class 3) 83 196 IPR002921 GO:0006629
Lja1g5615 612 Coils Coil 381 418 - -
Lja1g5615 612 Coils Coil 553 573 - -
Lja1g5615 612 Pfam Enhanced disease susceptibility 1 protein EP domain 410 608 IPR041266 -
Lja1g5615 612 Gene3D alpha/beta hydrolase 18 249 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5615 Lja-Chr1 98387269 98390656 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5615 74 186 Acyl Lipid Metabolism Gene Families AT5G14930 32.743 9.30e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5615 K18875 - gmx:100778851 861.292