Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5557 ATGGTTTCAGAGAAAAACCATTCCAAGAATGTGTGTGTGATCGGAGCCGGACCATCAGGGCTTGTGGCGGCTAGGGAGTTGAGAAAAGAAGGTCATCAGGTGGTTGTGCTGGAGCAGAATCATGAGGTTGGAGGGCAATGGCTGTATGAACCGAATGTACAAGGGGAGGATCCTTTAGGAAGAAAAACTATTCTTAAGGTGCATAGCAGTCTCTATGAGTCTTTGAGGCTGACATCTCCAAGGGAGATCATGGGGTTCTCTGACTTCCCATTTTTGGTCAAGAAAGGTAGAGACATGAGGAGGTTTCCTAGCCATACAGAGCTACTTCAGTATCTAAAGGATTTTTGTGACTGGTTTGGGTTGAGAGAGATAATTAGGTTCAATACAAGGGTGGATCATGTTGGAATGTTAGATTATGGTGCCTGTAGTAATGATTTGAAGTGGGTTGTTAGAAGCAGAGAGAAGAAGAATGAGAAGGTGGTGGAAGAGGTGTTTGATGCTGTGGTTGTGGCCACTGGTCATTACTCTCAACCAAGATTGCCCTCAATTAAAGGAATGGACAAATGGAAAAGAAATCAAATGCATAGTCACATTTACAGAACCCCAGAACCATTCCACAATGAGATTGTGGTTGTGGTTGGGAGTTCCTTAAGTGGACAAGATATATCAATGGAGCTTGTGGAAGTTGCAAAGGAAGTCCATATGAGTTCCAGATCTCTCAAAATCTCTGAGGGTTTATCTAAAGTCATATCCAAACATGAGAACTTTCACCTTCATCCAGAGATAGACTCCCTTCAAGAGGATGGATGGGTCACTTTCATGGATGGTTCTTGCATTCTTGCAGACACTATTTTGTACTGCACAGGGTACTCCTATGCATTCCCCTTTCTTGACACCAAAGGAATGGTAGTTGTGGATGATGACAGAGTGGGTCCTTTATATGAGCACACTTTCCCCCCATCACTTGCTCCATCCCTTTCCTTTATAGGCATCCCAAGAAAGATCATAGGATTCCCTTTCTTCGAATCGCAAGCAGTATGGATAGCACAACTTCTTTCTGGGAAAAAAGTATTGCCATCATGGGAGGAAATGATGAAATCCATCAAGGAGTTCTACCATTCAACAGAACTAGCAGGCATTCCTAAGCACTGTACCCATGAAATTGCAAACTTTGAGTACTGTGACAAATATGGGGAGAACGTAGGATTCCCACGATTAGAAGAATGGCGAAAAGGGCTGTGCCTATCTGCCATAATCAACTCTGATGTCAACTTGGAGACATATCGAGATTCGTGGGATGATGGTGAGCTGCTCCAAGAGGCCCTTCAAAGTCCTCACTTTACTCAACTTGGCCTTGAAGATTCTCCTCTGTAA 1374 0.4367 MVSEKNHSKNVCVIGAGPSGLVAARELRKEGHQVVVLEQNHEVGGQWLYEPNVQGEDPLGRKTILKVHSSLYESLRLTSPREIMGFSDFPFLVKKGRDMRRFPSHTELLQYLKDFCDWFGLREIIRFNTRVDHVGMLDYGACSNDLKWVVRSREKKNEKVVEEVFDAVVVATGHYSQPRLPSIKGMDKWKRNQMHSHIYRTPEPFHNEIVVVVGSSLSGQDISMELVEVAKEVHMSSRSLKISEGLSKVISKHENFHLHPEIDSLQEDGWVTFMDGSCILADTILYCTGYSYAFPFLDTKGMVVVDDDRVGPLYEHTFPPSLAPSLSFIGIPRKIIGFPFFESQAVWIAQLLSGKKVLPSWEEMMKSIKEFYHSTELAGIPKHCTHEIANFEYCDKYGENVGFPRLEEWRKGLCLSAIINSDVNLETYRDSWDDGELLQEALQSPHFTQLGLEDSPL* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5557 457 PANTHER DIMETHYLANILINE MONOOXYGENASE 5 451 - -
Lja1g5557 457 SUPERFAMILY FAD/NAD(P)-binding domain 8 247 IPR036188 -
Lja1g5557 457 Gene3D - 182 287 IPR036188 -
Lja1g5557 457 PRINTS Flavin-containing monooxygenase (FMO) signature 221 236 IPR000960 GO:0050660|GO:0050661
Lja1g5557 457 PRINTS Flavin-containing monooxygenase (FMO) signature 274 301 IPR000960 GO:0050660|GO:0050661
Lja1g5557 457 PRINTS Flavin-containing monooxygenase (FMO) signature 9 25 IPR000960 GO:0050660|GO:0050661
Lja1g5557 457 PRINTS Flavin-containing monooxygenase (FMO) signature 33 57 IPR000960 GO:0050660|GO:0050661
Lja1g5557 457 PRINTS Flavin-containing monooxygenase (FMO) signature 339 352 IPR000960 GO:0050660|GO:0050661
Lja1g5557 457 PANTHER FLAVIN-CONTAINING MONOOXYGENASE FMO GS-OX-LIKE 8 5 451 - -
Lja1g5557 457 SUPERFAMILY FAD/NAD(P)-binding domain 256 413 IPR036188 -
Lja1g5557 457 PIRSF FMO 7 252 IPR000960 GO:0050660|GO:0050661
Lja1g5557 457 PIRSF FMO 240 404 IPR000960 GO:0050660|GO:0050661
Lja1g5557 457 Gene3D - 11 430 IPR036188 -
Lja1g5557 457 Pfam Flavin-binding monooxygenase-like 9 239 IPR020946 GO:0004499|GO:0050660|GO:0050661
Lja1g5557 457 Pfam Flavin-binding monooxygenase-like 259 375 IPR020946 GO:0004499|GO:0050660|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5557 Lja-Chr1 96577353 96580704 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5557 - - gsj:114416580 824.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5557 1 96577353 96580704 Lja1g5557 1 96577353 96580704 ECH