Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5546 ATGTCAGACTCTAACTTCATCACTCTCTATCTGCAGGAAAAAAAAAGATCACTTCCAATGGATGGTTCAGGCAAGACTCTCAGAAGATCAATCCACTGTTTTCTTCAAAACTACCATTATTTCACCTCAACAGCAGCTTTCCTAGCCTTTCCTTTCTCAGCATCAATACTCCTGTCACAAGCTTTAGTTCCTACCTCTTCCTCTCTCCTACCTCAAATATACAATCACCTTAGAATTCTCTTTGATGCTGCAGGCTTTCCCTCCTCATCACAATTGTTTACCCGCAAGGTTTCTCAAACAATCACTTCCTCAATCTTCACCCTTCCACTCACCCTCACCTTTTTCCTCATTGCAAAAGCATCTACAATTCTGGCTCTGAATCACCACAGACAAAATTTATTACCACCTTCCTTCAATTGCCTAATACACCATTACAAGCCAATTCTCCACACCTATATTCACAACTCTTTCTTGATTCTCTCTGCTAATGCATCTTCTTTTTGCCTCTTTTTTCTATCATTGACCTTTGCTGAAGGGCTAGGATACTCTTCCCCAAGCTGCACACTTTTTCTCTCAGCTGCAACTGCAGTTGTTTCTTCTGTGATCCTTGCCACTGCACTTGTGATTTGCAACATGGCACTTATCATATCTGGCATGGAGGGACATGGTGGCTACATGGCAATTCTGAAAGCATGTGTTCTTCTAAGAGGAAACACATCAAAGGCTTTGTTCTTGGCTCTGCCTGGGAATTTAGCCCTGGCTGCTATTGAAGCATTGTTCCAATTCCGAGTTGTAAGAGCCTATCACAATGTTGGGAATTCAATCAATTCATGGCCTTTTATGGCATTAGAGGGAATTTTCATTGCTTATTTGTACTCAATTTCCATCATCATTGACACAATTGTGAGCTGCATGTTTTACAAAAGTTGCAACATGGGGTCGTTGGTTGATCAAGAAGACATGCATTTTTCGAGGATTGAATTGGCGGAGGAGCAGAATTATGAACTTGGGATTCAAGAACTTTCAAGAACTATATACCTTGAGTAA 1047 0.4097 MSDSNFITLYLQEKKRSLPMDGSGKTLRRSIHCFLQNYHYFTSTAAFLAFPFSASILLSQALVPTSSSLLPQIYNHLRILFDAAGFPSSSQLFTRKVSQTITSSIFTLPLTLTFFLIAKASTILALNHHRQNLLPPSFNCLIHHYKPILHTYIHNSFLILSANASSFCLFFLSLTFAEGLGYSSPSCTLFLSAATAVVSSVILATALVICNMALIISGMEGHGGYMAILKACVLLRGNTSKALFLALPGNLALAAIEALFQFRVVRAYHNVGNSINSWPFMALEGIFIAYLYSISIIIDTIVSCMFYKSCNMGSLVDQEDMHFSRIELAEEQNYELGIQELSRTIYLE* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5546 348 PANTHER PROTEIN, PUTATIVE-RELATED 23 335 - -
Lja1g5546 348 PANTHER OS08G0107100 PROTEIN-RELATED 23 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5546 Lja-Chr1 96313045 96314527 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5546 - - gmx:100797246 424.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5546 1 96313045 96314527 Lja4g2123 4 22775938 22777620 ECH
Lja1g5546 1 96313045 96314527 Lja1g5546 1 96313045 96314527 ECH