Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5540 ATGGCTAGGGTTCCGATAAGTCAATCTCCCTCAACGTCGGTGGTTTCCACCATCAGAGCCTACGCGCTTCCTCTTATTTTCTTCGCCGGTGCCATGTTCTACCAACTCGTTGCTATCCCCAATGCCTTCCCTCCTTCCCGTTACGATGTTCTGCAAATTGAGAGGTACAGTTCCATCGACGCTGTGCAGGAGGCTTACGATAAGCTTGAATCGAAATGGAATTCGGATGTAGAAGTTTCTGATATTCATGAGTTTATAAAGATTAGATATGCCTACGAGTTGCTGACAAATCCTTTGTGGAAAAGAGACTATGACATATTTGGCATTGATGAACAACTTCATGTTGTTGAGAGTGCTAGAAAGCGTTATGCAGGGAAAAATATTTCACAATTGGACTTCCCTTTACTACATTCCCCTTCCGGGTCTTTTGATCATTCATCTAAAGTCACTGTAAGTGACTTTCTGTCTGCAATTCCAGATTCAAAGCCATGGATAATTCAGCTGTATTCATCAGGGAGCAATCGTTGTGCTGAGTTTTCTGAGTCCTGGAATAAAATTGCTTCTTTATTGGATGGTGTTGCAAATATTGGTGTGGTGGAACTTGGTGAGAAGGAGCTCGCTATCTACCTTGCTGATAAAAGATCAACAGGAAAACCTTTTTTCAGAAATGGAATTCCATCTCTTGTTGCCATTCCTCCCGGATGTCATGCTGCAAAATGTTTTAGAAGGTTTGATGGTGAGCTTACAGTTGACAAGGTTACAAATTGGTTTGCAACAACTGTATTGACTTTACCTCAAATTAACTACTACTCGAAGGAGTCACTGGTACCGAATTTTCTTGGAAAAAGCAGTCAACATAAGGTAAAAGTCATCTTTTTTTCAAAAACTGGGGAGCGTGCTACTCCATTTATGCGACAGGCAGCTAAGGACTATTGGGCTGATGCTTCATTTGCATTCATTCTTTGGCGGGAAGAGGAATCTTCCTATTGGTGGGGAGCTTTTGGGGTGGAATCTGCACCTGCTATAGTATTTCTTAAAGACCCAGGTGTCAAACCGGTTGTGCACCATGGGTCAGTGAACAATACATATTTTCTGAATATGATGGAAAATAATAAACAGCAAGAGCTTCCACAACTAAGGAGTGTGACATCGATGGAGCTAGGCTGTGATCCTCGTGGCTACTCTCGTGCTGGATATGATACAATCATTTGGTACTGTGCTATTGCAGTAGGAAGGCCAAGTTTGGAATTGAACAAAATGCGTGAAACCATGTGCAGGGTCCAAGAAACATTGTCTAAGCACAGTGAGGTAGATGCATCATCTGAAAATCAATCCTTAGCTCCAGCTGTGAATGCATATAAGAGAAAGCGGTTGACATTTGCCTGGCTTGATGGTGAAAAGCAAAAGGACTATTGTCAATTTTACCTTGGTCCTGCGGCCAGCGATCATACTTGTGGACAAGGGAGGGGTTTGACAGATATTCCCCTCATATTCGTTATTCGATATTTAAGGAATAGCAGTGCTGTTGATAAGAAGACACAAGAAATGAAAAAGTGGAAATCTGTACTGGTCCAAGATCTAATGGATGATTCTGATCAGGCAGGCCAGTTTGTAGCTGGGTACAAGGGTGAAGTTGATATTTCACAGATAACCGAGTGGCTTGCAAATTTAATTAAAGATGGTGATTCCAGAGATTTACCATTCTTTACACTACGAACTCCTAAGCTTGTTCCAGATGACACAGAACCTCTCTGGGCCAAAACTTCACCCATGATTCCTTTGAAAAATCTGAAGCAGAGTATTCCGGGTGTTCTAAGTGGACTCTCAGTTTACCTTGAGGATCCGAGAATTGGTCCAGCTTTGCTTCTGGGAGCATTAATCTCTTTTGGCACCATCTGGCTGCGAAGGAGCCAACGAGTTCGGCCATCTCAACCAAATCAACCAAGTCAACCTAGTGCAAAGGCGCCTTCCAAGGAAGACAGAAAACAGAGACCGACGGACCGGGTCCGGAGTCGGTCAAACAAAAAAGCACCCCCTTCCATGACAGATTGGGAACCATCTGATGCTTACCAAATGCCACTATCAGATTCTGAATCTGATTAG 2103 0.4308 MARVPISQSPSTSVVSTIRAYALPLIFFAGAMFYQLVAIPNAFPPSRYDVLQIERYSSIDAVQEAYDKLESKWNSDVEVSDIHEFIKIRYAYELLTNPLWKRDYDIFGIDEQLHVVESARKRYAGKNISQLDFPLLHSPSGSFDHSSKVTVSDFLSAIPDSKPWIIQLYSSGSNRCAEFSESWNKIASLLDGVANIGVVELGEKELAIYLADKRSTGKPFFRNGIPSLVAIPPGCHAAKCFRRFDGELTVDKVTNWFATTVLTLPQINYYSKESLVPNFLGKSSQHKVKVIFFSKTGERATPFMRQAAKDYWADASFAFILWREEESSYWWGAFGVESAPAIVFLKDPGVKPVVHHGSVNNTYFLNMMENNKQQELPQLRSVTSMELGCDPRGYSRAGYDTIIWYCAIAVGRPSLELNKMRETMCRVQETLSKHSEVDASSENQSLAPAVNAYKRKRLTFAWLDGEKQKDYCQFYLGPAASDHTCGQGRGLTDIPLIFVIRYLRNSSAVDKKTQEMKKWKSVLVQDLMDDSDQAGQFVAGYKGEVDISQITEWLANLIKDGDSRDLPFFTLRTPKLVPDDTEPLWAKTSPMIPLKNLKQSIPGVLSGLSVYLEDPRIGPALLLGALISFGTIWLRRSQRVRPSQPNQPSQPSAKAPSKEDRKQRPTDRVRSRSNKKAPPSMTDWEPSDAYQMPLSDSESD* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5540 700 SUPERFAMILY Thioredoxin-like 148 260 IPR036249 -
Lja1g5540 700 ProSiteProfiles dnaJ domain profile. 46 108 IPR001623 -
Lja1g5540 700 MobiDBLite consensus disorder prediction 639 654 - -
Lja1g5540 700 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 16 28 699 - -
Lja1g5540 700 CDD DnaJ 48 97 IPR001623 -
Lja1g5540 700 SUPERFAMILY Chaperone J-domain 40 108 IPR036869 -
Lja1g5540 700 MobiDBLite consensus disorder prediction 655 674 - -
Lja1g5540 700 Pfam DnaJ domain 48 105 IPR001623 -
Lja1g5540 700 Gene3D Glutaredoxin 144 263 - -
Lja1g5540 700 MobiDBLite consensus disorder prediction 639 700 - -
Lja1g5540 700 Gene3D DnaJ domain 44 125 IPR036869 -
Lja1g5540 700 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 16 28 699 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5540 Lja-Chr1 95939129 95958967 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5540 - - gmx:100820244 1148.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5540 1 95939129 95958967 Lja1g5540 1 95939129 95958967 ECH