Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5537 ATGGCTGAAGCTATCATGGGTTTCACCGTTTTCAAGTCACATATTCATTGCTCATGTCTACAAACAAAGAGATTTGATGTGAACCCGTCTTCAAGACTGCCTAAGCTGCATTCAAACTCCACCCTCTTTCACAGATCGTGGCAGGTCTTTGAGAGTAAATGCAAGAGAGCATCTTTGTGTAAAGTGAATGCCTTGCCAGATTGGCCACTGATGGCAATTCTAGTAGAGCAAATGGAAGGGCAGAGAGATATGATCACTGAGAAAACAATTTGGCATCTTAGTGATGGCCAAATTAAGAATGTCTATTCTTGGTACATAATGTTCACTGTGTGGGGATGCTTGGTCTTTGGTTCCATGAAGGATCCATACTACGACTCAGAAACATATAGGGGAGATGGAGGAGATGGTACTGGCAACTGGATCTATGAGAAGCAAGAGATTATGGAAGCAGAAGCCAGAGAAGCTCTGTGGCGCGAGGAGTTGATTGAGGAGATAGAGCAAAAGGTTGGAGGGTTGAAAGAACTTGAAGAAGTAAGCACGAAAGAGGAAGTATTCAAGTGA 561 0.4332 MAEAIMGFTVFKSHIHCSCLQTKRFDVNPSSRLPKLHSNSTLFHRSWQVFESKCKRASLCKVNALPDWPLMAILVEQMEGQRDMITEKTIWHLSDGQIKNVYSWYIMFTVWGCLVFGSMKDPYYDSETYRGDGGDGTGNWIYEKQEIMEAEAREALWREELIEEIEQKVGGLKELEEVSTKEEVFK* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5537 186 Coils Coil 158 178 - -
Lja1g5537 186 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 4, CHLOROPLASTIC 1 185 IPR034570 GO:0009535|GO:0009773|GO:0010598
Lja1g5537 186 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 4, CHLOROPLASTIC 1 185 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5537 - - gmx:100800656 293.893