Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5536 ATGGCATGCTCCTTGAAGAGTGTTTTCTGTGTTCCTGAATTGATGAATGAGAGCATGGTTTTGGGGCTTTGTCCCTCAAGACATGGCAAAGCAAAATCAAGGACTACTTGTTCTGTTTCGAGTACTGGTTTCATGGGAAAATCCATTGCTCTTGCAAATGAAAAAGGCTCTGGGTATTGCAGTTCTAGAACCTCTAGAAATGCCCCTATCATGGCACAGTCATCAATTTGCATTAGCAGAACTTTGAAGTGGTGGAAAAAGAACCTTAAGCCTAATATGATTGAGATCCATTCAGCGCAAGAGCTTGTGAGTTCTTTGCTCAACGCTGGTGATTCATTGGTTGTGGTGGATTTCTATTCACCTGGCTGTGGTGGCTGCAAAGCACTCCACCCAAAGATCTGTCAAATTGCTGAACTGTACCCAACAGCAATCTTTCTGAAAGTAAATTACGAGGAGCTGAAAACTATGTGTCAAAGTCTGCACATTCATGTTTTACCATTCTTCAGATTCTACAGAGGAGCTGAGGGTCGAGTTTGTAGCTTCAGCTGTACCAATGCAACTATCAAGAAATTTAAAGATGCCTTAGCAAAGCATGGGAGTGAACGCTGTAGTTTAGGCCCTGCAAAAGGCTTAGATGATTCAGAGTTGAAAGATTTGGCTTCAATAGGTGAAATATCATCAGTAAATTCACCATTACTATATCCAATGAAAGGGAAATTGTTGGAGGATTTGGTTCTAGAAAACCATGATTTTTCTGGTGCTTGGAACATGGCAAGTAATCATGCATTGAATGGTTTATAA 801 0.4082 MACSLKSVFCVPELMNESMVLGLCPSRHGKAKSRTTCSVSSTGFMGKSIALANEKGSGYCSSRTSRNAPIMAQSSICISRTLKWWKKNLKPNMIEIHSAQELVSSLLNAGDSLVVVDFYSPGCGGCKALHPKICQIAELYPTAIFLKVNYEELKTMCQSLHIHVLPFFRFYRGAEGRVCSFSCTNATIKKFKDALAKHGSERCSLGPAKGLDDSELKDLASIGEISSVNSPLLYPMKGKLLEDLVLENHDFSGAWNMASNHALNGL* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5536 266 Gene3D Glutaredoxin 84 200 - -
Lja1g5536 266 PANTHER THIOREDOXIN, MITOCHONDRIAL 1 260 - -
Lja1g5536 266 PANTHER THIOREDOXIN-LIKE 1-2, CHLOROPLASTIC 1 260 - -
Lja1g5536 266 Pfam Thioredoxin 106 177 IPR013766 -
Lja1g5536 266 ProSiteProfiles Thioredoxin domain profile. 62 200 IPR013766 -
Lja1g5536 266 CDD TRX_family 109 196 - -
Lja1g5536 266 SUPERFAMILY Thioredoxin-like 83 199 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5536 Lja-Chr1 95657021 95659056 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5536 - - gmx:100801871 391.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5536 1 95657021 95659056 Lja1g5536 1 95657021 95659056 ECH