Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5524 ATGAGTTTCTTGAAATTCAGAGGATTCCTTATTCTAGTTTTCTGTGCGGGGATTTTAGCTTCTCAACCATACATGGTTTCTGGCCTGAGAAGCAAAGATCTTGCACTGAGATGGGATAAGAGGCAATTACCACTTGTTCAAATCTCTCGTGTTCTAAAAGCTGTTGCAATGGAGGATTTGCAATCAAAGATAGTATTGGCACCTGCACCTTCAGTGACATTTGAACCAGATCAATCAAATAAAAGGACAGTTCGAAAAGGGTCAGATCCAATTCACAACAGATGTTGA 288 0.3993 MSFLKFRGFLILVFCAGILASQPYMVSGLRSKDLALRWDKRQLPLVQISRVLKAVAMEDLQSKIVLAPAPSVTFEPDQSNKRTVRKGSDPIHNRC* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5524 95 MobiDBLite consensus disorder prediction 79 95 - -
Lja1g5524 95 MobiDBLite consensus disorder prediction 74 95 - -
Lja1g5524 95 PANTHER CLAVATA3/ESR (CLE)-RELATED PROTEIN 45 1 95 IPR038821 -
Lja1g5524 95 PANTHER CLAVATA3/ESR (CLE) GENE FAMILY MEMBER MTCLE11 1 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5524 Lja-Chr1 95320023 95320565 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5524 - - pvu:PHAVU_009G187200g 143.665