Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5523 ATGTCGGAGAAAACTCCTGCGGTTCTATCAAGGTTTATGTTTTGTGTGATGCTGATTTCTATGTTCCTTTTGGTCCTGTCTACCCTTTTCCTGCTCCAGTTTAGTAACCATTCTTTGATACCTAGATCAGTGTTAGAGCTTATTATTGTCAATAATACATCACTTTACTTCATGCCTGATACCAATAGGGAGCAAATTCAACTCCCTAAACACCCTTCTGAGGACGTAAGATTTCAATCATTAAAACCCAGTGAATCTGATTGGAAAGTTTCCAATTCAAGCCACAAAACAAGCTCTGTTAGACAGGAGACAAATATGGCATCTGACCGAACTCGGGCTCTATTGAGAGTATTTATGTATGATTTGCCTCCTGAATTTCACTTTGGTTTATTGGGTTGGAAGGGAAGTGTAAATAAAAAATGGCCACAGGTGGATGACCTCAAAGATATTCCGCGTTATCCGGGTGGACTGAACTTGCAGCACAGTGTGGAATACTGGCTCACCCTCGATCTTCTTTCATCGAACTCCCCGAAAGTTGGCCAACCTTGCCCTGTTATTAGAGTACAGAATTCAAGTCAAGCAGATGTGATTTTTGTGCCGTTTTTCTCGTCTCTGAGTTACAATCGACATTCCAAGATTCGTGAGGGTGAAAAAGTTAGTGTTGACAAAACATTGCAAGACAGATTGGTGAAATTCTTAATGGGCCAGAAAGAATGGAAACGTTCAGGAGGGAAGAATCATCTGATTGTAGCCCACCATCCTAACAGCATGCTGGATGCTAGAACGAAGTTGGGCTCTGCTATGCTCGTGCTTGCAGATTTTGGTAGATATCCAAATGAATTGGCAAACATCAAGAAAGATATAATTGCCCCGTATAGGCATGTCGTACGCACCATTCCAAGAGCTGAATCGGCTTCATATGAGGAACGTTCCACACTGGTGTATTTCCAAGGGGCAATATACAGGAAAGATGGAGGATTTATTCGCCAAGAACTGTATTACCTCCTCAAAGATGAGAAAGATGTGCATTTCACATTTGGGAGCATAGGAGGAAATGGGATTAAGCAAGCAAGCAAGGGGATGGGCTTTTCCAAATTCTGTCTGAACATTGCTGGAGATACCCCATCGTCCAATCGCCTCTTTGATGCCATAGTAAGTCATTGTGTTCCTGTCATCATCAGCGATGAAATTGAGCTACCATTCGAAGATGTCTTGGACTACTCAGAGTTTTCCTTACTTGTCCGAGCCGCCGATGCTGTAAAGCAAGGCTACCTGCTGAATCTCCTTCGCTCAATCAAGCGGGAGGAGTGGACCAAGATGTGGGAAAGGTTGAAGGAGATTACCCATCACTTTGAGTATCAATATCCATCCCAGCCTGGGGATGCAGTAAACATGATTTGGCAGGAAGTTCAGCGTAAGATATCTTCAACACAGTTCAATTTGCACAGGAAGAACAGGTACCGGAGATCTCAGCTTCATGTTAAGACTAACTGA 1494 0.4311 MSEKTPAVLSRFMFCVMLISMFLLVLSTLFLLQFSNHSLIPRSVLELIIVNNTSLYFMPDTNREQIQLPKHPSEDVRFQSLKPSESDWKVSNSSHKTSSVRQETNMASDRTRALLRVFMYDLPPEFHFGLLGWKGSVNKKWPQVDDLKDIPRYPGGLNLQHSVEYWLTLDLLSSNSPKVGQPCPVIRVQNSSQADVIFVPFFSSLSYNRHSKIREGEKVSVDKTLQDRLVKFLMGQKEWKRSGGKNHLIVAHHPNSMLDARTKLGSAMLVLADFGRYPNELANIKKDIIAPYRHVVRTIPRAESASYEERSTLVYFQGAIYRKDGGFIRQELYYLLKDEKDVHFTFGSIGGNGIKQASKGMGFSKFCLNIAGDTPSSNRLFDAIVSHCVPVIISDEIELPFEDVLDYSEFSLLVRAADAVKQGYLLNLLRSIKREEWTKMWERLKEITHHFEYQYPSQPGDAVNMIWQEVQRKISSTQFNLHRKNRYRRSQLHVKTN* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5523 497 MobiDBLite consensus disorder prediction 82 103 - -
Lja1g5523 497 Pfam Exostosin family 114 427 IPR040911 -
Lja1g5523 497 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 6 486 IPR004263 GO:0006486|GO:0016757
Lja1g5523 497 PANTHER EXOSTOSIN FAMILY-LIKE PROTEIN 6 486 - -
Lja1g5523 497 MobiDBLite consensus disorder prediction 84 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5523 Lja-Chr1 95315797 95319488 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5523 - - gmx:100795371 803.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5523 1 95315797 95319488 Lja1g5523 1 95315797 95319488 ECH