Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5522 ATGGCTAAGCTTGTTTGTGTTCTGCTTCTAGCACTCATTGCCATTTCCATGATCGCAACACAGGTTATGGCAAAAGAGAATGCTCAGTATCACTTGGACAGTGGGAATTATGGACCAGGGAGTCTAAAGAGCAATGAGTGCCCATCACAATGCACTAGAAGATGTGCACAGACACAATATCACAAGCCCTGCATGTTCTTCTGCCAAAAATGCTGTGCCAAGTGTTTGTGTGTCCCTCCTGGCTACTATGGGAACAAGTCTGTGTGCCCCTGCTACAACAACTGGAAGACCAAGCGTGGAGGACCCAAATGCCCTTGA 318 0.4748 MAKLVCVLLLALIAISMIATQVMAKENAQYHLDSGNYGPGSLKSNECPSQCTRRCAQTQYHKPCMFFCQKCCAKCLCVPPGYYGNKSVCPCYNNWKTKRGGPKCP* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5522 105 PANTHER GIBBERELLIN-REGULATED FAMILY PROTEIN 1 105 - -
Lja1g5522 105 Pfam Gibberellin regulated protein 46 105 IPR003854 -
Lja1g5522 105 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 1 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5522 Lja-Chr1 95292219 95293332 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5522 - - rcu:8263434 203.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5522 1 95292219 95293332 Lja1g5522 1 95292219 95293332 ECH