Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5514 ATGGCCACCAAAGGGAACCCAGGAGACAATAGAAACAATAGGAGTACAATGTCTGTTTTCATTGTGGTTGGTTTTTGTGGTTTCTTCTACATATTGGGTTTGTGGCAAAGGAGTGGTTTTGGAAAAGGTGATAGCATAGCTGTTGAGATTACTAAACAGACAGATTGCAGTGTTCTCTCTGATCTTAATTACGAGACTCACCGCGACGGCGATGCGGGGACGCCGGATGATTCTGATGAACCGGTCAAGGAGTTCAAGCCGTGCGAGGATCGCTACATTGATTACACGCCTTGTCATGATCAAGCGAGGGCGATGACGTTTCCCAGAGAGAGTATGAATTATAGAGAGAGGCATTGTCCTCCTGAGGAGGAGAAGTTGTCATGTCTCATACCTGCGCCTAGAGGGTACTCGACGCCGTTTCCTTGGCCCAAGAGTCGCGATTATGTGCCTTTCGCAAACGCGCCTTACAAGAGTTTGACGGTTGAGAAGGCTGTGCAGAATTGGATACAGTACGAAGGAAGTGTCTTCAGGTTTCCCGGTGGAGGAACGCAGTTTCCCCATGGTGCTGATGCTTACATTGATGGACTTGCAGCTGTTATTCCCTTTGACAATGGGATGGTTAGAACCGCATTAGATACTGGCTGTGGGGTTGCCAGTTGGGGTGCATACCTATTTAAGAAAAATGTCGTTACCATGTCAATTGCACCAAGAGACTCTCATGAAGCACAAGTTCAATTTGCTTTGGAAAGAGGTGTTCCAGCAATCATTGGTGTTCTTGGAACAATAATGCTACCTTTTCCTTCTGGATCTTTTGACATGGCACATTGTTCTCGCTGCTTGATTCCATGGGGCGTAAATGGTGGAATGTACATGAAGGAAGTTGACCGAGTTCTTAGACCTGGTGGTTACTGGATACTTTCTGGCCCCCCCATCAACTGGAAGACTAGCTACCAAGCATGGCAACGTCCTGAAGAAGAGCTTGAGGAGGAGCAGAGGCAGATTGAAGATACTGCTAAACTTCTTTGTTGGGAAAAGAAACATGAGAAAGGTGAAACTGCAATCTGGAGAAAAAGTTTAAATAATGATGAGTGCAATGAACAAGATACTCAACCTACAATATGTGAATCCGCAAATTCGGATGATGTTTGGTACAAGAAGATGGAAAATTGTGTTTCTCCTTCTAAACATAGTGGTTCATGGAAGCCATTCCCAGAGAGACTCTATGCTGTTCCTTCCAGAATTACCAGTGGATCCGTTCCTGGTGTTTCCGCTGAGGTATTTGAGAACGACAGCCGATTATGGAAGAAGCATGTGAATGCATACAAACGGATCAACAAAATCATTGACTCAGGTAGATATCGCAACATAATGGACATGAATGCTGGCCTAGGAGGTTTTGCTGCTGCCTTGGATTCTCCCAAATTATGGGTTATGAATGTTGTGCCTACAATTGCGGAGAAAGCTAGCCTGGGTGTTATATTTGAGCGAGGATTGATTGGCATTTACCACGACTGGTGTGAAGCCTTCTCCACATATCCAAGGACCTATGACCTTATCCATGCAAATGGAGTTTTCAGCCTATACAAGGATAAGTGTAGTGCAGAAGACATTTTATTGGAGATGGACCGGATCCTACGACCTGAAGGAGCAGTAATATTTCGGGAACAAGCAGATGTGCTAATGCAGGTGAAAAGAATTGTAAAAGGTATGAGATGGAATACAAAAATGGTGGACCATGAGGATGGTCCACTGATTACAGAGAAGGTGTTGTTTGCTGTCAAGCAGTACTGGGTTGCAGGTGATAACTCCACAAGCTCAGAGTGA 1824 0.4496 MATKGNPGDNRNNRSTMSVFIVVGFCGFFYILGLWQRSGFGKGDSIAVEITKQTDCSVLSDLNYETHRDGDAGTPDDSDEPVKEFKPCEDRYIDYTPCHDQARAMTFPRESMNYRERHCPPEEEKLSCLIPAPRGYSTPFPWPKSRDYVPFANAPYKSLTVEKAVQNWIQYEGSVFRFPGGGTQFPHGADAYIDGLAAVIPFDNGMVRTALDTGCGVASWGAYLFKKNVVTMSIAPRDSHEAQVQFALERGVPAIIGVLGTIMLPFPSGSFDMAHCSRCLIPWGVNGGMYMKEVDRVLRPGGYWILSGPPINWKTSYQAWQRPEEELEEEQRQIEDTAKLLCWEKKHEKGETAIWRKSLNNDECNEQDTQPTICESANSDDVWYKKMENCVSPSKHSGSWKPFPERLYAVPSRITSGSVPGVSAEVFENDSRLWKKHVNAYKRINKIIDSGRYRNIMDMNAGLGGFAAALDSPKLWVMNVVPTIAEKASLGVIFERGLIGIYHDWCEAFSTYPRTYDLIHANGVFSLYKDKCSAEDILLEMDRILRPEGAVIFREQADVLMQVKRIVKGMRWNTKMVDHEDGPLITEKVLFAVKQYWVAGDNSTSSE* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5514 607 Gene3D Vaccinia Virus protein VP39 164 372 IPR029063 -
Lja1g5514 607 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 94 594 IPR004159 GO:0008168
Lja1g5514 607 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 6 602 IPR004159 GO:0008168
Lja1g5514 607 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 332 IPR029063 -
Lja1g5514 607 PANTHER METHYLTRANSFERASE PMT2-RELATED 6 602 - -
Lja1g5514 607 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 440 581 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5514 Lja-Chr1 95009695 95014490 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5514 - - gmx:100807547 1124.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5514 1 95009695 95014490 Lja1g5514 1 95009695 95014490 ECH