Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5512 ATGGTGGCCGACAAGACCAAGAAGCAGAAGGTTTCAGAAAAGAGCGAGAATCCTGAGGAAATTGACGGAGACCTTGTCCTCTCCATCGAGAAGTTGCAGGAGATTCAAGACGAGCTCGAAAAGATCAATGAGGAGGCTAGTGATAAAGTTCTGGAAATTGAGCAGAAGTACAATGAGATACGGAAGCCGGTGTATGATAAGCGTAGTGATATTATCAAGGCTATTCCTGATTTCTGGTTGACTGCTTTTCTGAGCCATCCTGCTCTTGGCGAACTTCTGAATGATGAAGATCAGAAGATATTTAAGTATTTGACTTCTCTTGAGGTTGAAGATTATAAGGATGTCAAGTCAGGCTACTCAATCACCTTCAATTTCAAACCCAATCCATATTTTGAGGATGCTAAGCTTGTTAAGACTTTTACCTTCCTTGAAGAAGGAATAACAAAGGTTACTGCTACACCCATTAAGTGGAAAGAGGGCAAGGGAATACCCAATGGAGTTGCTCATGAGAAGAAAGGAAACAAGCGGACTCCTGTTGATGTCAGTTTCTTTACTTGGTTTGCTCACACTGAGCAGAAAGATGATATGGATGACATTCATGACGAGGTTGCAGAGTTGATCAAAGATGATTTTTGGCCGAATCCACTTACCTATTTCAACAATGATGAGCCTGATGAAGAGGATGGTGATGAGGATGAAGCTGATGATGAGGGAAAGGATGAGGATGACTCTGATGAGGATGACGAGGACCAAGATGATGATGATGACGAGGAGGAGGATGCCTAG 786 0.4275 MVADKTKKQKVSEKSENPEEIDGDLVLSIEKLQEIQDELEKINEEASDKVLEIEQKYNEIRKPVYDKRSDIIKAIPDFWLTAFLSHPALGELLNDEDQKIFKYLTSLEVEDYKDVKSGYSITFNFKPNPYFEDAKLVKTFTFLEEGITKVTATPIKWKEGKGIPNGVAHEKKGNKRTPVDVSFFTWFAHTEQKDDMDDIHDEVAELIKDDFWPNPLTYFNNDEPDEEDGDEDEADDEGKDEDDSDEDDEDQDDDDDEEEDA* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5512 261 Gene3D - 1 75 - -
Lja1g5512 261 MobiDBLite consensus disorder prediction 213 261 - -
Lja1g5512 261 Coils Coil 25 59 - -
Lja1g5512 261 Gene3D Nucleosome assembly protein 76 223 - -
Lja1g5512 261 MobiDBLite consensus disorder prediction 221 261 - -
Lja1g5512 261 MobiDBLite consensus disorder prediction 1 22 - -
Lja1g5512 261 Pfam Nucleosome assembly protein (NAP) 73 220 IPR002164 GO:0005634|GO:0006334
Lja1g5512 261 Pfam Nucleosome assembly protein (NAP) 29 73 IPR002164 GO:0005634|GO:0006334
Lja1g5512 261 SUPERFAMILY NAP-like 6 220 IPR037231 -
Lja1g5512 261 PANTHER NUCLEOSOME ASSEMBLY PROTEIN (NAP)-RELATED 2 251 - -
Lja1g5512 261 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 2 251 IPR002164 GO:0005634|GO:0006334
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5512 Lja-Chr1 94922144 94925994 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5512 K11290 - gmx:100808081 404.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5512 1 94922144 94925994 Lja1g5512 1 94922144 94925994 ECH