Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5509 ATGGGATCTGGAGCTGGAAATTTCCTGAAGTTGGTTCTCAAGAATTTTGATGTAATTGTTGGGCCTGTTCTTAGTCTTGCATATCCTCTATATGCCTCAGTTAGGGCAATTGAGACCAAATCTCCTGTTGATGACCAGCAATGGCTTCCTTATTGGGTTCTGTATTCCATGATCACACTCTTTGAGCTAACTTTTGCCAAATTTCTTCAATGGATTCCTATCTGGCCATATGCAAAGCTGATGATAACCGGCTGGTTGGTCCTTCCTTACTTCAGTGGTGCTGCCTATGTTTATCACCATTATGTTAGACCTTTCATTGTCAATCCTCAGACCGTTAACATCTGGTATGTTCCAAGCAAAAAGGACCCTTCAGGTAAGCCAGGTGACATTCTAACTGCAGCAGAGAAGTACATTCAAGAGAATGGAACTGAAGCATTTGAGAATATGATCACAAAGGATCTGAAGACCAGAAGCTCTGAGGGACCAGAGGCTCTGAAGGTCCAGAAGCTCTGA 513 0.4308 MGSGAGNFLKLVLKNFDVIVGPVLSLAYPLYASVRAIETKSPVDDQQWLPYWVLYSMITLFELTFAKFLQWIPIWPYAKLMITGWLVLPYFSGAAYVYHHYVRPFIVNPQTVNIWYVPSKKDPSGKPGDILTAAEKYIQENGTEAFENMITKDLKTRSSEGPEALKVQKL* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5509 170 Pfam TB2/DP1, HVA22 family 29 105 IPR004345 -
Lja1g5509 170 PANTHER HVA22-LIKE PROTEINS 1 156 IPR004345 -
Lja1g5509 170 PANTHER HVA22-LIKE PROTEIN 1 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5509 Lja-Chr1 94802262 94804528 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5509 K17279 - gmx:100306331 276.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5509 1 94802262 94804528 Lja1g5509 1 94802262 94804528 ECH