Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5501 ATGTATAAGGTATACCTAGTTTCGTCTTTTCTTCTGGGGCTTTTGGTCCTTTCTCAAGCACAAGCAAATGATAACAAGATTGGGTTTTATGAGCTCAAGAAAGGGAACTTCAGGCTGAATTTGACAAACTATGGTGCCACAGTTGTCTCCGTCATTGTGCCTGATAAACATGGAAATTTAGCTGACATTGCCCTTGGCTATGATACCGTTGATGAGTACAAGAATGATGGAGTTTATTTTGGAGCCCTTGTTGGACGTGTTGCCAATAGAATTGGGAATGCTCAGTTCACTTTGGATGGAAAAACCTATAAATTGCCTGCTAATGACAAGGACAACACACTCCACGGTGGCCCCACAGGGTTTGGAGATGTTGTGTGGACAGTAAAAACCCACAAGGAAGACAGCCACATTACATTTACCTACCACAGTTTTGATAATGAACAAGGATTTCCTGGACAACTTGAGGTCTCTGTTACTTACATGATCATTGGAACAAACAAATTGGGAGTGAGAATGATTGCCACCCCAGTAGACAAACCCACCCCAGTGAATCTTGCCCAGCACACATACTGGAACCTGAGGGGCCATGACAGTGGTGACATTCTCTCACACACAGTCCAGATTTTTGGCTCAAAAATCACCCCAGTGGATGACGAGCTCATCCCCACTGGTGAGTTCCAAGAAGTGAAGGGAACCCCTTATGATTTCCTTGAACCAAAGGAAGTTGGTAGCCAAATCCATGACCTTCCTGGCCTATATGACGTCAACTATGTGCTTGACCCAAGCAGCCCCCAACACTTGAGGAAGGTGGCTATAGTGAAGGACAATGTCTCTGGCAGGAAACTAGAGTTGTGGTCAAACCAACCTGGTGTTCAATACTATACTAGTGGTATGTTGAAGGATACTAAGGGAAAAGGTGGAGCCACTTATCACCAATATTCTGGAATTGCATTGGAGACTCAAGGCTTCCCTGACTCTGTGAATCACCCCAATTTTCCATCCATGATTGTGCGTCCTGGACAGACATACAAGCATTACATGGTCTACAGATTCACTGCTAGCTAA 1065 0.446 MYKVYLVSSFLLGLLVLSQAQANDNKIGFYELKKGNFRLNLTNYGATVVSVIVPDKHGNLADIALGYDTVDEYKNDGVYFGALVGRVANRIGNAQFTLDGKTYKLPANDKDNTLHGGPTGFGDVVWTVKTHKEDSHITFTYHSFDNEQGFPGQLEVSVTYMIIGTNKLGVRMIATPVDKPTPVNLAQHTYWNLRGHDSGDILSHTVQIFGSKITPVDDELIPTGEFQEVKGTPYDFLEPKEVGSQIHDLPGLYDVNYVLDPSSPQHLRKVAIVKDNVSGRKLELWSNQPGVQYYTSGMLKDTKGKGGATYHQYSGIALETQGFPDSVNHPNFPSMIVRPGQTYKHYMVYRFTAS* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5501 354 PIRSF GALM 17 354 IPR015443 GO:0016853|GO:0019318
Lja1g5501 354 PANTHER ALDOSE 1-EPIMERASE 3 354 - -
Lja1g5501 354 CDD galactose_mutarotase_like 30 351 - -
Lja1g5501 354 SUPERFAMILY Galactose mutarotase-like 21 351 IPR011013 GO:0003824|GO:0005975|GO:0030246
Lja1g5501 354 Gene3D - 17 353 IPR014718 GO:0030246
Lja1g5501 354 Pfam Aldose 1-epimerase 30 350 IPR008183 GO:0005975|GO:0016853
Lja1g5501 354 PANTHER ALDOSE-1-EPIMERASE 3 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5501 Lja-Chr1 94434117 94436207 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5501 4 353 Miscellaneous Gene Families AT3G47800 59.143 2.68e-159 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5501 K01785 - gmx:100807070 563.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5501 1 94434117 94436207 Lja1g5501 1 94434117 94436207 ECH