Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5463 ATGTATAATCAGGCGAATCGCGGTTCTCATCCATTGCCGCCACCACCACCACAGCCACCGGCTTATCAACAGGCTCCGCCGCCTCCTCCACCTCCGTCGCATTTTCAGCATTTTGCCCCACCACCTCCACCTCCACCGCCTCATGTGTATTTACATGGACCTCCAAGCACATCCACATTTATGCCAAATGTAGGACAGTCATATGCAACCCCTTCTCAAATGCACCATGGAAACGGCATGGCGCCACCGCATAGTTACTCTACCCTTGGTCAGAATAGTTACTCTACCCTTGGTCAGAATTCACAGCATTCTTTGAATATAGAGGTCCATAGTCATCCAATGCCGCCCCCGGTTCATCCTCCCCATGCGGCCCACACTCACCAGGAACCATCTTGGGCTCCAGGGCCGCCAGCTAGAGTATTGCCACCTCCCCCACCCCCTCCTCCCTCTTCTTCCCAAGGACAAATTTTGTATAATTCTCCTTTCCATCAACCGCCTTCGCAGCCTGGTGACATTCAGAATCTTCAGCGTAGCCATAATACTCTTCCTCCTCCTCCTCCCCCTCCCACTTGTGGGCCGGGTGGAGTGAATGCTCATTCAACTGTTGGGAATTACCAAATGCCTTCCATTAGTGCCCCACCACCACCGCTACCGTCCTGTCCACCACCAGTTGCACCATCTCCACCGCCTATTTCCCCTTCTGTGACTTCTGCATCCTCCCAGGCTGCACGGACTGATGACCTGAACTGCTTGAAGGTTTCTGGCTCTGAATCAAAGGATATGGATTCAGTTGACAGAGTTGTAGCCCCCTGTCCTTCTGGCACTGTGCCTTTGTGCAATTCTGATGCCAATCAGGGCGGTGGAAGTTGTAGAGAGGTTGCTGTTGCCGGGAGAGATGAGCTGTTGTCAACTAGAAGTGTAATTTTGAATCTTCCCCCAGCTCCAACCAAGCCAACAGATGAAAAAACTGTGCAGAAGATTGAAGGTTTTTGTCAGCTTATTGCTGAGAATGGTGCTGATATTGAAGACAAGATTCGTCAAGATGAATTTCAGAATCCTGAATATGCATTTTTGTTTGGTGGGGACCCCGGAACTGAAGCTGCAATTTCTCACTCATATTTCCTATGGGTGAAGAAAAAATATAAATTGGAACTTAGGGGGCATGAAGAGAATAGTGAATCACAGTTAAGGCCTCTAGCAGTAAGCTCTTTTCAGGAACAGCATCATCTGCATGCTGCAACCGTAAATGCAGATTCTGACATGGAAATGGAAGATGATATCACGCTTTCTGACAAGGACCAGGGATCAAATTATGCAATTGAAGCCTTTACTAAGCCTCATGATCAGGTCAATATTGTGTTTAGCATTGATAAGCAGCAGCAGCAGAATTCAACAGAAAATGATCCTACCAAGGACATCTTATCTGATGGATCAAGGCTTTTATCTGATGAGCATATGAAGCCTGCAAAGTCAGTTACTAAGGTTAGCAGTCTTGTGAATGAGACAACTGAAGTGGTTGAGTGCCCCCTGGGTAGTGTTTTGGAGAGATCTTCAACTCCTGTAAGTATTGATTTCATACAAAATGGTACTTCGGATCACGATGAAGCTACTAATCCTGTTAGAGATTCTGGGAAACTTATAAGAAGTGGAAGCCCGATAAGACTTCTTCAAGATTATGCTTCTGATGGCACTTCAGATAATGAAGATGAAGTCTGTGCTGCAGATGCTAATGTATTTACTGTCTCATCCGGAGCTGACACTGGTGTTTCAGCTGCTCATAAAGATTCAAATAGCTATTTGGAGACTGATATTGGATCTAAGAGTCCCTCTAATACTCAAACAGAGCTTGAGATGCTCTCCAAAACCACACAGAATGATTCAGAAATATCTCCACATTTAGTTCAAGAATCTAAGGGAACCTGTAAAGGATCTGTCTCAAGTTCTAATCATGGATGTATTGAGCATAATCTTGAAAATCAGGTGTCTGCTCATTTTACTCGTTCAACGGAAGCTTTCCAGGTTAAAGATGGGTTAAGTGGTACTGGCATTGACAGTGATCATAAGGGTGGTTATGCTGAACAGGAAAATGAGAGGAAAAACCCAAAGATTAAACCAACTGTTATGAAAGTAGATAAATTTGGAAGGCATCTCAAAGAAGGTGCTACAGATAGCGACTCTGATGATTCTTACAATCATCAGACTAGGAGGCTGAAGAAAAGAGATAGAAGCCGTAGTCGCAGCACATCTCCTATAGACAGGAGGAGTAGGAGGAGGAGGAGGAGTCCTCGGAGGCGAAACGATAAAAGAAGCCGAAGCCGGTCTCGCAGCCGGTCTCCTCGGCGCCGTGGAAGCAGGAGTAGGTCCCCGATCTTAAGACGTTCAGGTGACTTTCGTGGTGAGAATGTGAGAAGGGAAAAGGGCCAGTGCTTTAATTTCCTTCGTGGAAAGTGCTATCGAGGAGCATCTTGTAGGTACAGTCATCATGAACCTGAGAAGAATGCAACTTCTAGGCGTAATAGAAATAAACATGATCTCGAAGTTTATTCTCATGAAAAAGTTTCTAGGAAGAATGAAGGCATGAAGGATATTTCTTCTAAAATGTCAGATTATGAGCATGATGAAGTCAGAAGTCAGGGTGTAGATCTTTGCCAGAATGTAAATGGCCAAGAAGCAGTGCAGAGAAAAGAAGATTCTGGGATGCATACTGTTGTGTCTACTAACTTTGGTCTTGATGGTCAATCTGTTGATAGCAATCCAAATAAATCTGAAGGTCTCAGAGAAGTTGCTCCAGAAGTGCAGGAAACTTTAGTAGTCAGAGAGGTGCCTAAAACTTTAATCCATGAAAATGATGGTTTTCAGAAAGAAGTGAGTCCTCATCAGCAACACTTGGTTGATGGCTTCCGTGCTGATGCTTTTATACCATCTGGTGATACACCTGCGAATGTCATTGCCTCAGAAGATGGTTCATTTGTTCAGCAAGTACAGTCCAATGCTTCTGGTGGAGTTCCAGAACAATCAGCAGACCCATCTCAAGTTTTAAATGTGTCATTAAGGACTGATTCATCATCTGATAAAGGATCAATAATTTCTGCTAGTGCTGATAAGATTTCTGGTAGTGAACCTTTGCCATATATGTTACCATCAACTCAGATACAGTTAGCTACTAGTTCTGTTGATCCATGTGTCACATCTGAGCAGCCTTCAGTGCATGCTCAGGTTTCTAAAGAGTTACCCCCACATAGTGGTTCCTCAGTGGAATTTCCACTTCCTACCTACCAGTTGCCTGCCTCTGCCGTTTCCCATTCTCAGAGTGAAAATGCTGTGCATATGCCACAAAATTCAAGGCAACATGGTGCGGTGCAACAAAATTCATTCTTTCCTTTCCAATCCACAATTAGAGGAAAGTTTGAACCTTACCCAGCTCCGTTCCACACACCAAACTCTCACTTCAGTGTACCGCCAAATAGCTGTTGGACATCCTTGCCGCTGCCGCCACCACCACCACCACCATCATCAGTGTATAATTCCAGTTTAAACTCGGAAGTTGCTAAACCATTTGTTTCTTCAGAATTTAATCAGAGTCAATTGCATTTGAGAACAGACTTTGTTTCTCAGACTTTCATGAATCCTGGATTGCCAACGCATTCTCAGAGTTCTAAGTTTCAAGAGCAAGCATACCCTTCAATGCAGGATCATTCACAAAAGTTCATGCATACAGAACCTTTCTCTCCAAACCATCTCCCTCAGGGGAACCCAGCAAGTCAGTTGCTTTCAGGCCCTAGTCTCGGAAGAGAAAGCCATCATAATCTCTCAATGCAGGACACACATTTTTCAAGCTCCTTACCTTTTGGTGGTCTGGATCCTCAACCAAAGCAATTTTCCTGGGAGTCAGATGTGAACAGACTCAGACCTTGTTTGGATGGAAGGTTACCTCCTGAAGGACATTTCAATACATCTTCCCACATTCATCCATTACCACAGAAGCCACAATCAGTTTATAATTTTCAGTATCCTGCATCTAATGTTAATTTGGGTGTGTCCAGAGAGACTGTTAATGCATCCAGATATCCACAAGATGTTCTTGATAGTAATCATTCAACATCTTTTCCTGATTTTGGAGGATCAAGAATTACTGCTCACTATAATCCTTACGCGTCAACCTTTGACCAGTCTCTTAGTTCTAAATTCAGTTCAAGTATTTTAAGGCAAGAAAATGACATAATCAATGGTAACACTTGTGGTTCTTCTAGATCGAACCATACTCCTATTTATGGGGAAGGAGATGGTGTTGGACCAAAATCTGCATCCTCACCAAAATCAGCTAGAGCTGTTGGTCAACCTTTACCCAGGTCTGGTGGTGAACAATATGATCCACTTTTTGACAGCATTGAGCCATCATCCTCTTTGAAGAAATTAGATTTCGATCACAAGCGGGACACTACGGGTGAATCCAATATAAGGCTTAGATCCAAAAGTTCTCATGTGTCCTCGGACATGGAAGAGAAGAAGCATCAGGAGGTTGGGGCTGTTGCATCTACCAGCTGTCAAAATAATGATGAATATGGTGAGACAGCAGATGCTGAAGTGGGTGCTGTTGAAAATGACAGCCTAAGTAATCATACAGATGTTGAAAATTCAGGGGATGATGAGATTAATCAGATCAAGTCTCCTGGGAAAAAGAAGAAGAGCAAGGATTCGCGGTCTATGAAATTGTTCAAAGTTTCCATTGCAAACTTTGTGAAAGAGGTTTTGAAACCATCATGGCGACAGGGTAATATGAGTAAGGTGGCTTTCAAGACCATTGTGAAAAAGACTGTTGATAAGGTGTCAGGAGCCATGAAAGGCCACCGTGTACCCAAGTCTCAAGCGAAGATAAGTCAGTACATTGACTCGTCACAACGAAAGTTGACTAAACTTGTGATGGGTTATGTTGACAAGTATGTCAAGGTGTGA 4953 0.4385 MYNQANRGSHPLPPPPPQPPAYQQAPPPPPPPSHFQHFAPPPPPPPPHVYLHGPPSTSTFMPNVGQSYATPSQMHHGNGMAPPHSYSTLGQNSYSTLGQNSQHSLNIEVHSHPMPPPVHPPHAAHTHQEPSWAPGPPARVLPPPPPPPPSSSQGQILYNSPFHQPPSQPGDIQNLQRSHNTLPPPPPPPTCGPGGVNAHSTVGNYQMPSISAPPPPLPSCPPPVAPSPPPISPSVTSASSQAARTDDLNCLKVSGSESKDMDSVDRVVAPCPSGTVPLCNSDANQGGGSCREVAVAGRDELLSTRSVILNLPPAPTKPTDEKTVQKIEGFCQLIAENGADIEDKIRQDEFQNPEYAFLFGGDPGTEAAISHSYFLWVKKKYKLELRGHEENSESQLRPLAVSSFQEQHHLHAATVNADSDMEMEDDITLSDKDQGSNYAIEAFTKPHDQVNIVFSIDKQQQQNSTENDPTKDILSDGSRLLSDEHMKPAKSVTKVSSLVNETTEVVECPLGSVLERSSTPVSIDFIQNGTSDHDEATNPVRDSGKLIRSGSPIRLLQDYASDGTSDNEDEVCAADANVFTVSSGADTGVSAAHKDSNSYLETDIGSKSPSNTQTELEMLSKTTQNDSEISPHLVQESKGTCKGSVSSSNHGCIEHNLENQVSAHFTRSTEAFQVKDGLSGTGIDSDHKGGYAEQENERKNPKIKPTVMKVDKFGRHLKEGATDSDSDDSYNHQTRRLKKRDRSRSRSTSPIDRRSRRRRRSPRRRNDKRSRSRSRSRSPRRRGSRSRSPILRRSGDFRGENVRREKGQCFNFLRGKCYRGASCRYSHHEPEKNATSRRNRNKHDLEVYSHEKVSRKNEGMKDISSKMSDYEHDEVRSQGVDLCQNVNGQEAVQRKEDSGMHTVVSTNFGLDGQSVDSNPNKSEGLREVAPEVQETLVVREVPKTLIHENDGFQKEVSPHQQHLVDGFRADAFIPSGDTPANVIASEDGSFVQQVQSNASGGVPEQSADPSQVLNVSLRTDSSSDKGSIISASADKISGSEPLPYMLPSTQIQLATSSVDPCVTSEQPSVHAQVSKELPPHSGSSVEFPLPTYQLPASAVSHSQSENAVHMPQNSRQHGAVQQNSFFPFQSTIRGKFEPYPAPFHTPNSHFSVPPNSCWTSLPLPPPPPPPSSVYNSSLNSEVAKPFVSSEFNQSQLHLRTDFVSQTFMNPGLPTHSQSSKFQEQAYPSMQDHSQKFMHTEPFSPNHLPQGNPASQLLSGPSLGRESHHNLSMQDTHFSSSLPFGGLDPQPKQFSWESDVNRLRPCLDGRLPPEGHFNTSSHIHPLPQKPQSVYNFQYPASNVNLGVSRETVNASRYPQDVLDSNHSTSFPDFGGSRITAHYNPYASTFDQSLSSKFSSSILRQENDIINGNTCGSSRSNHTPIYGEGDGVGPKSASSPKSARAVGQPLPRSGGEQYDPLFDSIEPSSSLKKLDFDHKRDTTGESNIRLRSKSSHVSSDMEEKKHQEVGAVASTSCQNNDEYGETADAEVGAVENDSLSNHTDVENSGDDEINQIKSPGKKKKSKDSRSMKLFKVSIANFVKEVLKPSWRQGNMSKVAFKTIVKKTVDKVSGAMKGHRVPKSQAKISQYIDSSQRKLTKLVMGYVDKYVKV* 1651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5463 1650 MobiDBLite consensus disorder prediction 599 632 - -
Lja1g5463 1650 MobiDBLite consensus disorder prediction 1493 1507 - -
Lja1g5463 1650 MobiDBLite consensus disorder prediction 1542 1559 - -
Lja1g5463 1650 MobiDBLite consensus disorder prediction 1409 1520 - -
Lja1g5463 1650 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 1 1650 - -
Lja1g5463 1650 Gene3D Surp module 313 384 IPR035967 GO:0003723|GO:0006396
Lja1g5463 1650 MobiDBLite consensus disorder prediction 1 243 - -
Lja1g5463 1650 MobiDBLite consensus disorder prediction 1537 1567 - -
Lja1g5463 1650 MobiDBLite consensus disorder prediction 1209 1268 - -
Lja1g5463 1650 MobiDBLite consensus disorder prediction 751 788 - -
Lja1g5463 1650 MobiDBLite consensus disorder prediction 56 74 - -
Lja1g5463 1650 MobiDBLite consensus disorder prediction 526 549 - -
Lja1g5463 1650 MobiDBLite consensus disorder prediction 153 179 - -
Lja1g5463 1650 ProSiteProfiles SURP motif repeat profile. 326 374 IPR000061 GO:0003723|GO:0006396
Lja1g5463 1650 MobiDBLite consensus disorder prediction 84 108 - -
Lja1g5463 1650 SUPERFAMILY Surp module (SWAP domain) 309 381 IPR035967 GO:0003723|GO:0006396
Lja1g5463 1650 Gene3D - 803 878 - -
Lja1g5463 1650 MobiDBLite consensus disorder prediction 457 476 - -
Lja1g5463 1650 MobiDBLite consensus disorder prediction 457 471 - -
Lja1g5463 1650 ProSiteProfiles Zinc finger C3H1-type profile. 803 830 IPR000571 GO:0046872
Lja1g5463 1650 MobiDBLite consensus disorder prediction 1468 1485 - -
Lja1g5463 1650 MobiDBLite consensus disorder prediction 135 152 - -
Lja1g5463 1650 PANTHER EXPRESSED PROTEIN 1 1650 - -
Lja1g5463 1650 MobiDBLite consensus disorder prediction 676 799 - -
Lja1g5463 1650 MobiDBLite consensus disorder prediction 209 233 - -
Lja1g5463 1650 MobiDBLite consensus disorder prediction 9 52 - -
Lja1g5463 1650 MobiDBLite consensus disorder prediction 688 735 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5463 Lja-Chr1 93226661 93233995 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5463 - - gmx:100807768 1705.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5463 1 93226661 93233995 Lja1g5463 1 93226661 93233995 ECH