Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5452 ATGTCAGGCGCATCATCAGCAACTCCCGTTCTGAAGGACGAGCTCGACATCGTGATCCCCACGATCCGCAACCTTGATTTCTTGGAGATGTGGAGGGCATTCTTCGAGCCTTACCATCTCATCATCGTGCAGGACGGTGATCCAACCAAGACCATTAAGGTCCCTCAGGGCTTCGACTATGAGCTCTACAATCGCAATGACATCAACCGCATTCTGGGTCCTAAAGCATCTTGCATTTCCTTCAAGGACTCTGCTTGCAGATGCTTCGGCTTCTTGATGTCCAAAAAGAAGTACATCTTCACCATCGATGATGACTGCTTTGTTGCGAAAGATCCATCTGGCGCTGAAATTAATGCCCTGCAGCAACACATTAAGAACCTTCTGACCCCATCAACCCCATTTTTCTTCAACACTCTCTATGATCCTTACAGAGAAGGTACTGATTTTGTTCGCGGGTATCCATTCAGTTTGCGTGAAGGTGTCCCAACAGCAATTTCTCATGGCCTCTGGCTCAACATTCCTGATTATGATGCCCCAACTCAGCTTGTCAAGCCTCTAGAAAGAAACACTAGGTATGTGGATGCAGTCATGACAATTCCAAAGGGAACCCTCTTCCCCATGTGTGGTATGAATTTGGCCTTCAACCGTGAACTAATTGGTCCTGCGATGTACTTTGGACTCATGGGCGATGGGCAACCTCTTGGGCGCTATGATGATATGTGGGCTGGGTGGTGCATGAAGGTCATAAGTGATCATTTGGGACTTGGGGTCAAGACAGGTTTGCCTTACATATGGCACAGCAAAGCTAGCAACCCTTTTGTGAACCTTAAGAAGGAGTACAAAGGGATTTACTGGCAGGAAGAGCTGATCCCATTTTTCCAATCTGTTTCACTTCCAAAGGATTGCACAACTGTGCAGGCATGCTATGTTGAACTCTCCAAGCAAGTTAAGGCAAAACTTGGTGGGGTTGATGAGTATTTCAACAAGCTTGCAGATGCCATGGTCACATGGATTGAAGCTTGGGATGAACTAAACCCATCTGGGGGGAAATCTGATGCATTGGTCAATGGTGTGGCGAAGTAA 1083 0.4709 MSGASSATPVLKDELDIVIPTIRNLDFLEMWRAFFEPYHLIIVQDGDPTKTIKVPQGFDYELYNRNDINRILGPKASCISFKDSACRCFGFLMSKKKYIFTIDDDCFVAKDPSGAEINALQQHIKNLLTPSTPFFFNTLYDPYREGTDFVRGYPFSLREGVPTAISHGLWLNIPDYDAPTQLVKPLERNTRYVDAVMTIPKGTLFPMCGMNLAFNRELIGPAMYFGLMGDGQPLGRYDDMWAGWCMKVISDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIYWQEELIPFFQSVSLPKDCTTVQACYVELSKQVKAKLGGVDEYFNKLADAMVTWIEAWDELNPSGGKSDALVNGVAK* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5452 360 CDD Glyco_tranf_GTA_type 17 111 - -
Lja1g5452 360 SUPERFAMILY Nucleotide-diphospho-sugar transferases 17 245 IPR029044 -
Lja1g5452 360 PANTHER UDP-ARABINOSE MUTASE 4 351 IPR037595 -
Lja1g5452 360 Pfam Reversibly glycosylated polypeptide 11 345 IPR037595 -
Lja1g5452 360 PANTHER UDP-ARABINOPYRANOSE MUTASE 3 4 351 - -
Lja1g5452 360 PIRSF UPTG 5 349 IPR004901 GO:0016866|GO:0071669
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5452 Lja-Chr1 92670139 92673422 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5452 K13379 - gmx:100816315 696.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5452 1 92670139 92673422 Lja1g5452 1 92670139 92673422 ECH