Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5444 ATGGATTTGAACACTTGTCTTTCTTCCGAGCGAGACCTAGACAACTCGTCCTTCAAATTCGATCGTGTCCTCTTCGATGACCTCGTCCAGATTGTGCCTCTTGTTCACTCCCTCACTACTGATAAGAAAGCAAGCAGTTCGTTTGCGCGTCGAGGTTCGATGATCTACACTAAGGCACCTTCAAAAGAGTCGTGGTTGGAAAGAATGAAATATTTAAAAGTCAGGAGCATAGGTCAATCTTTTCCTGCTAAAAAGAAAAAAGATCATGGAGAAAAAGGACAAATAAAAGAAGAGTACTTCTTAGTGAAAGAACAGGTGGAGGAACTGCAGATGAAGTTATTGGAGAAAGATGAACTTTTAAAGTCAGCAGAAAACTCAAGAAATCAGATGAGTTCTGTTAATGAGAAACTTGATGAACTGAAACACCAGGCTGCACAAAAGGACTCTTTGCTGAAGTCTACACAACAACAACTCTTTGATGTGAAGATGATGCTTGCAGACAATCAAGCTGCTCTTGAAAAGATACAGTGGGAATCAATGATATCCAACAAGAAAGCAGAGAAACTTCAAGAAGAGATAGGTTCCATGCAAGGAGATCTTTCATCATTTACATTGCTACTTGAAGGCCTGACAATAACAGACAATGCTGAATACATTGATGATTATGATATTAAGCCTTATGTTCACTCCAATCACCTTCCTAGCATTGATGATTTGGACGAGATGGAAATGCATAAAATCGAAGAAGCAAGAAAAGCTTATAATGTTGCTGTTGCTTATGCGAAAGAAAAACAGGATCAAGAATCTATTGCTGCTGCTGCCAATGCTAGGTTACATCTTCAATCAATTCTTTTCAAACCCAAAATTTCCTCTTTGTAG 879 0.3879 MDLNTCLSSERDLDNSSFKFDRVLFDDLVQIVPLVHSLTTDKKASSSFARRGSMIYTKAPSKESWLERMKYLKVRSIGQSFPAKKKKDHGEKGQIKEEYFLVKEQVEELQMKLLEKDELLKSAENSRNQMSSVNEKLDELKHQAAQKDSLLKSTQQQLFDVKMMLADNQAALEKIQWESMISNKKAEKLQEEIGSMQGDLSSFTLLLEGLTITDNAEYIDDYDIKPYVHSNHLPSIDDLDEMEMHKIEEARKAYNVAVAYAKEKQDQESIAAAANARLHLQSILFKPKISSL* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5444 292 PANTHER PROTEIN MICROTUBULE BINDING PROTEIN 2C 16 94 - -
Lja1g5444 292 PANTHER PROTEIN MICROTUBULE BINDING PROTEIN 2C 96 286 - -
Lja1g5444 292 Coils Coil 106 157 - -
Lja1g5444 292 PANTHER PROTEIN MICROTUBULE BINDING PROTEIN 2C 16 94 IPR040289 GO:0008017|GO:0010497
Lja1g5444 292 PANTHER PROTEIN MICROTUBULE BINDING PROTEIN 2C 96 286 IPR040289 GO:0008017|GO:0010497
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5444 Lja-Chr1 92439776 92443669 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5444 - - gmx:100806411 349.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5444 1 92439776 92443669 Lja1g5444 1 92439776 92443669 ECH