Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5428 ATGTTGATCATCACTACCATTGGGATCTTAATCTCCCTCCTCTGTTCACCATCTACTGTTTTCTCCACCAGATTACTCGATAGGCTCTATCTCCCTTCATCACTCACAGGACCCGAGACCTTAGCGTTTGATTCCATTGGTGGAGGCCCTTACACCGGTGTTTCTGATGGAAGAATTATGAAATTTGATGAATCAGATCCTTGCCGTTGTTTTGTTGAATTTGCTCACATCACCCCAGACAGGAACAAGACAATGTGCGATGGCATTTCTGACTTCTCATCACTGCAAGAAACATGTGGAAGGCCTTTGGGACTGAGTTTCAATTACAACACAGGGGACTTGTATATCGTTGATGCTTATTTTGGGCTTCTGAAGGTTCCTTATGATGGAGGTGCTGCAACTCAACTTGTTGCTGATAATGAAGGTGACCCTTTTGGGTTTCTCACTGCTGTTGACGTGGATCCTCAAACTGGAATCGTTTATTTCACAGAAGCTAGCTCTACTTTCAAGATCAGGGACATCTATGAGCTGCTAAATAGTACAGATCGTTCTGGAAAACTCTTCAGCTATGATCCAAAAACCGAAGAAACCTCATTGCTACTCGATGATATTGCTGTGGCAGCTGGTGTGGCAGTAAGCAACAACGGTTCCTTTGTCCTTGTTAGCGAGTACATGGAGAACAGAGTCCTGAGATTCTGGCTCACCGGACCGAAAGCGAATTCTGTAGATCTATTCTTGGAGCTTCCAGGGAAACCAGACAACATCAAGAGGAATTCAAGGAACGAGTTTTGGGTGGCGGTTAACTACGCTTTCGGCCAACCTCCTCCCCCAATGCCTCCTGTTTTGCCTATGGGACTCAGGGTCAATGAGGAAGGGACAGTTTTACAGGCTGTGCCTCTTGTTCAGGCCTTTGGGACTGAATCAGTCAGTGATGTTCAGGAGTCTGATGGGAAACTCTACGCGGCGTCGCTTCGTCTTTCTTATGCTAACGTTCTCACTGTCTAG 1005 0.4607 MLIITTIGILISLLCSPSTVFSTRLLDRLYLPSSLTGPETLAFDSIGGGPYTGVSDGRIMKFDESDPCRCFVEFAHITPDRNKTMCDGISDFSSLQETCGRPLGLSFNYNTGDLYIVDAYFGLLKVPYDGGAATQLVADNEGDPFGFLTAVDVDPQTGIVYFTEASSTFKIRDIYELLNSTDRSGKLFSYDPKTEETSLLLDDIAVAAGVAVSNNGSFVLVSEYMENRVLRFWLTGPKANSVDLFLELPGKPDNIKRNSRNEFWVAVNYAFGQPPPPMPPVLPMGLRVNEEGTVLQAVPLVQAFGTESVSDVQESDGKLYAASLRLSYANVLTV* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5428 334 Pfam Strictosidine synthase 150 236 IPR018119 GO:0009058|GO:0016844
Lja1g5428 334 PANTHER STRICTOSIDINE SYNTHASE-RELATED 7 333 - -
Lja1g5428 334 SUPERFAMILY Calcium-dependent phosphotriesterase 23 326 - -
Lja1g5428 334 Pfam Strictosidine synthase-like, N-terminal 27 62 - -
Lja1g5428 334 Gene3D - 19 334 IPR011042 -
Lja1g5428 334 PANTHER STRICTOSIDINE SYNTHASE 7 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5428 Lja-Chr1 92001558 92004261 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5428 - K01757 mtr:MTR_2g058450 461.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5428 1 92001558 92004261 Lja1g5428 1 92001558 92004261 ECH