Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5426 ATGGTTTTCGCTTCATTTCGAAGATACTTAAGCATGAGGAGCCAAAGCTCCAAGGTTCAGACTTTGTATGACCACTGCAAGAGTATCTTCTCGCTCTCTGGAAAACCCTCTCCTCCTTCTTCCCAAGCTTTGCTGAAACTCTCTTCCATTTTGGACACTGTTCAACCAACTGATGTTGGGCTCAGAGTGGAAACTGCAGATGATGATCGAGGGCATGGATTTTTTGGTGTTAACCAACTAAATAGAGTAGCTCGATGGGCACAGCCGATAACTTATGTGGACATTCATGAATGTGACAGTTTTACGATGTGTATGTTTTGTTTTCCAACTTCTTCGGTCATTCCACTCCACGACCATCCTGGGATGACTGTATTTAGCAAACTTCTCTATGGCTCTTTGCATGTCAAGGCTTATGACTGGGTTGAACCTCCCTGCATTATAGAAAGCAAGGAACCAGGATATCCTCAAGTAAGACTAGCAAAGTTAGCAGTTGACAAGGTTTTGAATGCACCATGTGAGACATCAGTTTTATATCCAAAGCAAGGTGGAAATCTGCACTGTTTTACAGCAGTTACACCTTGTGCTGTGCTGGACGTTCTCGCGCCTCCTTACAGAGAAGATGAAGGAAGGAAGTGCACTTACTATCATGATTATCCTTATTCAACATTCTCAGGTAAAGGATCTATAGGTGATGGTGAAGAGGATGAATATGCTTGGCTTGCAGAGATAGAAACTCCTGGTGATCTTTATATGCGCTCGGGGGTATATGCTGGCCCAGCTATTAAGGTCTAG 792 0.4356 MVFASFRRYLSMRSQSSKVQTLYDHCKSIFSLSGKPSPPSSQALLKLSSILDTVQPTDVGLRVETADDDRGHGFFGVNQLNRVARWAQPITYVDIHECDSFTMCMFCFPTSSVIPLHDHPGMTVFSKLLYGSLHVKAYDWVEPPCIIESKEPGYPQVRLAKLAVDKVLNAPCETSVLYPKQGGNLHCFTAVTPCAVLDVLAPPYREDEGRKCTYYHDYPYSTFSGKGSIGDGEEDEYAWLAEIETPGDLYMRSGVYAGPAIKV* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5426 263 Gene3D Jelly Rolls 78 227 IPR014710 -
Lja1g5426 263 Pfam PCO_ADO 50 261 IPR012864 GO:0016702
Lja1g5426 263 PANTHER 2-AMINOETHANETHIOL DIOXYGENASE 13 261 - -
Lja1g5426 263 CDD cupin_ADO 99 204 - -
Lja1g5426 263 PANTHER UNCHARACTERIZED 13 261 IPR012864 GO:0016702
Lja1g5426 263 SUPERFAMILY RmlC-like cupins 17 219 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5426 Lja-Chr1 91778269 91782049 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5426 K23953 - gmx:100807889 465.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5426 1 91778269 91782049 Lja1g5426 1 91778269 91782049 ECH